Cluster: MGYG000004532_CGC5
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004532
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004532_5 | MGYG000004532_5_53 | 61444 | 63498 | + | 9.B.97.5.1 |
| STP | MGYG000004532_5 | MGYG000004532_5_54 | 63934 | 64911 | - | Nitroreductase |
| pfam | MGYG000004532_5 | MGYG000004532_5_55 | 64972 | 65319 | - | Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_56 | 65316 | 66491 | - | GT4 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_57 | 66570 | 67445 | - | GT2 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_58 | 67450 | 68562 | - | GT4 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_59 | 68559 | 69608 | - | GT2 |
| pfam | MGYG000004532_5 | MGYG000004532_5_60 | 69688 | 70839 | - | Epimerase_2 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_61 | 70846 | 71538 | - | GT32 |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_62 | 71588 | 72784 | - | GT4 |
| pfam | MGYG000004532_5 | MGYG000004532_5_63 | 72845 | 73966 | - | PS_pyruv_trans |
| TC | MGYG000004532_5 | MGYG000004532_5_64 | 73981 | 75516 | - | 2.A.66.1.40 |
| pfam | MGYG000004532_5 | MGYG000004532_5_65 | 75855 | 76994 | - | EpsG |
| CAZyme | MGYG000004532_5 | MGYG000004532_5_66 | 77000 | 78067 | - | GT4 |
| TC | MGYG000004532_5 | MGYG000004532_5_67 | 78172 | 78972 | - | 9.B.18.1.2 |
| pfam | MGYG000004532_5 | MGYG000004532_5_68 | 79057 | 79740 | - | CpsB_CapC |
| TC | MGYG000004532_5 | MGYG000004532_5_69 | 79881 | 82304 | - | 8.A.3.3.4 |
Gene ID: MGYG000004532_5_53
Type: TC
Location: 61444 - 63498 (+)
Type: TC
Location: 61444 - 63498 (+)
Gene ID: MGYG000004532_5_54
Type: STP
Location: 63934 - 64911 (-)
Type: STP
Location: 63934 - 64911 (-)
Gene ID: MGYG000004532_5_55
Type: pfam
Location: 64972 - 65319 (-)
Type: pfam
Location: 64972 - 65319 (-)
Gene ID: MGYG000004532_5_56
Type: CAZyme
Location: 65316 - 66491 (-)
Type: CAZyme
Location: 65316 - 66491 (-)
Gene ID: MGYG000004532_5_57
Type: CAZyme
Location: 66570 - 67445 (-)
Type: CAZyme
Location: 66570 - 67445 (-)
Gene ID: MGYG000004532_5_58
Type: CAZyme
Location: 67450 - 68562 (-)
Type: CAZyme
Location: 67450 - 68562 (-)
Gene ID: MGYG000004532_5_59
Type: CAZyme
Location: 68559 - 69608 (-)
Type: CAZyme
Location: 68559 - 69608 (-)
Gene ID: MGYG000004532_5_60
Type: pfam
Location: 69688 - 70839 (-)
Type: pfam
Location: 69688 - 70839 (-)
Gene ID: MGYG000004532_5_61
Type: CAZyme
Location: 70846 - 71538 (-)
Type: CAZyme
Location: 70846 - 71538 (-)
Gene ID: MGYG000004532_5_62
Type: CAZyme
Location: 71588 - 72784 (-)
Type: CAZyme
Location: 71588 - 72784 (-)
Gene ID: MGYG000004532_5_63
Type: pfam
Location: 72845 - 73966 (-)
Type: pfam
Location: 72845 - 73966 (-)
Gene ID: MGYG000004532_5_64
Type: TC
Location: 73981 - 75516 (-)
Type: TC
Location: 73981 - 75516 (-)
Gene ID: MGYG000004532_5_65
Type: pfam
Location: 75855 - 76994 (-)
Type: pfam
Location: 75855 - 76994 (-)
Gene ID: MGYG000004532_5_66
Type: CAZyme
Location: 77000 - 78067 (-)
Type: CAZyme
Location: 77000 - 78067 (-)
Gene ID: MGYG000004532_5_67
Type: TC
Location: 78172 - 78972 (-)
Type: TC
Location: 78172 - 78972 (-)
Gene ID: MGYG000004532_5_68
Type: pfam
Location: 79057 - 79740 (-)
Type: pfam
Location: 79057 - 79740 (-)
Gene ID: MGYG000004532_5_69
Type: TC
Location: 79881 - 82304 (-)
Type: TC
Location: 79881 - 82304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.