Cluster: MGYG000004532_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004532
- CGC Family ID: CGCFAM_05274
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004532_18 | MGYG000004532_18_17 | 16399 | 17340 | + | 3.A.1.132.1 |
| TC | MGYG000004532_18 | MGYG000004532_18_18 | 17478 | 18299 | + | 3.A.1.132.1 |
| pfam | MGYG000004532_18 | MGYG000004532_18_19 | 18483 | 20009 | + | DUF7088 |
| pfam | MGYG000004532_18 | MGYG000004532_18_20 | 20049 | 22331 | + | DUF4340 | DUF4340 |
| CAZyme | MGYG000004532_18 | MGYG000004532_18_21 | 22389 | 24512 | + | CBM32 | GH29 |
Gene ID: MGYG000004532_18_17
Type: TC
Location: 16399 - 17340 (+)
Type: TC
Location: 16399 - 17340 (+)
Gene ID: MGYG000004532_18_18
Type: TC
Location: 17478 - 18299 (+)
Type: TC
Location: 17478 - 18299 (+)
Gene ID: MGYG000004532_18_19
Type: pfam
Location: 18483 - 20009 (+)
Type: pfam
Location: 18483 - 20009 (+)
Gene ID: MGYG000004532_18_20
Type: pfam
Location: 20049 - 22331 (+)
Type: pfam
Location: 20049 - 22331 (+)
Gene ID: MGYG000004532_18_21
Type: CAZyme
Location: 22389 - 24512 (+)
Type: CAZyme
Location: 22389 - 24512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.