Cluster: MGYG000004522_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004522
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004522_4 | MGYG000004522_4_54 | 60849 | 63857 | + | GH2 |
| NULL(UNKNOWN) | MGYG000004522_4 | MGYG000004522_4_55 | 63861 | 64316 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004522_4 | MGYG000004522_4_56 | 64470 | 65933 | + | 2.A.3.7.4 |
| STP | MGYG000004522_4 | MGYG000004522_4_57 | 66356 | 66604 | + | PTS-HPr |
| STP | MGYG000004522_4 | MGYG000004522_4_58 | 66793 | 67035 | + | FeoA |
| TC | MGYG000004522_4 | MGYG000004522_4_59 | 67075 | 67296 | + | 9.A.8.1.6 |
| TC | MGYG000004522_4 | MGYG000004522_4_60 | 67420 | 69747 | + | 9.A.8.1.6 |
Gene ID: MGYG000004522_4_54
Type: CAZyme
Location: 60849 - 63857 (+)
Type: CAZyme
Location: 60849 - 63857 (+)
Gene ID: MGYG000004522_4_55
Type:
Location: 63861 - 64316 (+)
Type:
Location: 63861 - 64316 (+)
Gene ID: MGYG000004522_4_56
Type: TC
Location: 64470 - 65933 (+)
Type: TC
Location: 64470 - 65933 (+)
Gene ID: MGYG000004522_4_57
Type: STP
Location: 66356 - 66604 (+)
Type: STP
Location: 66356 - 66604 (+)
Gene ID: MGYG000004522_4_58
Type: STP
Location: 66793 - 67035 (+)
Type: STP
Location: 66793 - 67035 (+)
Gene ID: MGYG000004522_4_59
Type: TC
Location: 67075 - 67296 (+)
Type: TC
Location: 67075 - 67296 (+)
Gene ID: MGYG000004522_4_60
Type: TC
Location: 67420 - 69747 (+)
Type: TC
Location: 67420 - 69747 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902496115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.