Cluster: MGYG000004522_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004522
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004522_3 | MGYG000004522_3_64 | 79692 | 81146 | - | GH1 |
| TC | MGYG000004522_3 | MGYG000004522_3_65 | 81148 | 82497 | - | 4.A.3.2.6 |
| TC | MGYG000004522_3 | MGYG000004522_3_66 | 82507 | 82800 | - | 4.A.3.2.6 |
| TC | MGYG000004522_3 | MGYG000004522_3_67 | 82847 | 83173 | - | 4.A.3.2.7 |
Gene ID: MGYG000004522_3_64
Type: CAZyme
Location: 79692 - 81146 (-)
Type: CAZyme
Location: 79692 - 81146 (-)
Gene ID: MGYG000004522_3_65
Type: TC
Location: 81148 - 82497 (-)
Type: TC
Location: 81148 - 82497 (-)
Gene ID: MGYG000004522_3_66
Type: TC
Location: 82507 - 82800 (-)
Type: TC
Location: 82507 - 82800 (-)
Gene ID: MGYG000004522_3_67
Type: TC
Location: 82847 - 83173 (-)
Type: TC
Location: 82847 - 83173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902496115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004522_3_64 | vegetarian > vegan | 2.12286 | 0.01949 |
| MGYG000004522_3_65 | vegetarian > vegan | 1.80125 | 0.02458 |
| MGYG000004522_3_66 | vegetarian > vegan | 2.06097 | 0.02458 |
| MGYG000004522_3_67 | vegetarian > vegan | 1.30604 | 0.02458 |