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Cluster: MGYG000004510_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004510_19 MGYG000004510_19_32 32378 35614 + 1.B.14.6.1
TC MGYG000004510_19 MGYG000004510_19_33 35638 37272 + 8.A.46.1.1
CAZyme MGYG000004510_19 MGYG000004510_19_34 37558 40017 + GH31_4
CAZyme MGYG000004510_19 MGYG000004510_19_35 40304 41428 - GH43_24
pfam MGYG000004510_19 MGYG000004510_19_36 41665 43659 - SusD_RagB | SusD-like_3
TC MGYG000004510_19 MGYG000004510_19_37 43671 46976 - 1.B.14.6.1
TF MGYG000004510_19 MGYG000004510_19_38 47168 51247 + HTH_AraC
NULL(UNKNOWN) MGYG000004510_19 MGYG000004510_19_39 51600 51785 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004510_19 MGYG000004510_19_40 52755 53846 + 3.D.2.3.1
Gene ID: MGYG000004510_19_32
Type: TC
Location: 32378 - 35614 (+)
Gene ID: MGYG000004510_19_33
Type: TC
Location: 35638 - 37272 (+)
Gene ID: MGYG000004510_19_34
Type: CAZyme
Location: 37558 - 40017 (+)
Gene ID: MGYG000004510_19_35
Type: CAZyme
Location: 40304 - 41428 (-)
Gene ID: MGYG000004510_19_36
Type: pfam
Location: 41665 - 43659 (-)
Gene ID: MGYG000004510_19_37
Type: TC
Location: 43671 - 46976 (-)
Gene ID: MGYG000004510_19_38
Type: TF
Location: 47168 - 51247 (+)
Gene ID: MGYG000004510_19_39
Type:
Location: 51600 - 51785 (+)
Gene ID: MGYG000004510_19_40
Type: TC
Location: 52755 - 53846 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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