Cluster: MGYG000004510_CGC17
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004510
- CGC Family ID: CGCFAM_01143
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004510_7 | MGYG000004510_7_2 | 380 | 2353 | - | 3.A.1.2.21 |
| TC | MGYG000004510_7 | MGYG000004510_7_3 | 2582 | 5683 | + | 1.B.14.6.1 |
| pfam | MGYG000004510_7 | MGYG000004510_7_4 | 5700 | 7439 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000004510_7 | MGYG000004510_7_5 | 7433 | 8830 | + | DUF4960 | DUF5018 |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_6 | 8842 | 10431 | + | GH32 |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_7 | 10446 | 12173 | + | GH32 |
| peptidase | MGYG000004510_7 | MGYG000004510_7_8 | 12287 | 15166 | - | M16.UPW |
| TC | MGYG000004510_7 | MGYG000004510_7_9 | 15366 | 16082 | + | 1.A.14.2.2 |
| pfam | MGYG000004510_7 | MGYG000004510_7_10 | 16417 | 17304 | + | Fic |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_11 | 17376 | 20825 | - | GH92 |
| pfam | MGYG000004510_7 | MGYG000004510_7_12 | 20980 | 21480 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_13 | 21498 | 23963 | - | GH92 |
| pfam | MGYG000004510_7 | MGYG000004510_7_14 | 24976 | 26577 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004510_7 | MGYG000004510_7_15 | 26614 | 29607 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_16 | 29688 | 31043 | - | GH28 |
| pfam | MGYG000004510_7 | MGYG000004510_7_17 | 31185 | 31871 | - | RadC | UPF0758_N |
| pfam | MGYG000004510_7 | MGYG000004510_7_18 | 31852 | 33084 | - | Phosphodiest |
| CAZyme | MGYG000004510_7 | MGYG000004510_7_19 | 33128 | 34255 | - | GT2 |
Gene ID: MGYG000004510_7_2
Type: TC
Location: 380 - 2353 (-)
Type: TC
Location: 380 - 2353 (-)
Gene ID: MGYG000004510_7_3
Type: TC
Location: 2582 - 5683 (+)
Type: TC
Location: 2582 - 5683 (+)
Gene ID: MGYG000004510_7_4
Type: pfam
Location: 5700 - 7439 (+)
Type: pfam
Location: 5700 - 7439 (+)
Gene ID: MGYG000004510_7_5
Type: pfam
Location: 7433 - 8830 (+)
Type: pfam
Location: 7433 - 8830 (+)
Gene ID: MGYG000004510_7_6
Type: CAZyme
Location: 8842 - 10431 (+)
Type: CAZyme
Location: 8842 - 10431 (+)
Gene ID: MGYG000004510_7_7
Type: CAZyme
Location: 10446 - 12173 (+)
Type: CAZyme
Location: 10446 - 12173 (+)
Gene ID: MGYG000004510_7_8
Type: peptidase
Location: 12287 - 15166 (-)
Type: peptidase
Location: 12287 - 15166 (-)
Gene ID: MGYG000004510_7_9
Type: TC
Location: 15366 - 16082 (+)
Type: TC
Location: 15366 - 16082 (+)
Gene ID: MGYG000004510_7_10
Type: pfam
Location: 16417 - 17304 (+)
Type: pfam
Location: 16417 - 17304 (+)
Gene ID: MGYG000004510_7_11
Type: CAZyme
Location: 17376 - 20825 (-)
Type: CAZyme
Location: 17376 - 20825 (-)
Gene ID: MGYG000004510_7_12
Type: pfam
Location: 20980 - 21480 (+)
Type: pfam
Location: 20980 - 21480 (+)
Gene ID: MGYG000004510_7_13
Type: CAZyme
Location: 21498 - 23963 (-)
Type: CAZyme
Location: 21498 - 23963 (-)
Gene ID: MGYG000004510_7_14
Type: pfam
Location: 24976 - 26577 (-)
Type: pfam
Location: 24976 - 26577 (-)
Gene ID: MGYG000004510_7_15
Type: TC
Location: 26614 - 29607 (-)
Type: TC
Location: 26614 - 29607 (-)
Gene ID: MGYG000004510_7_16
Type: CAZyme
Location: 29688 - 31043 (-)
Type: CAZyme
Location: 29688 - 31043 (-)
Gene ID: MGYG000004510_7_17
Type: pfam
Location: 31185 - 31871 (-)
Type: pfam
Location: 31185 - 31871 (-)
Gene ID: MGYG000004510_7_18
Type: pfam
Location: 31852 - 33084 (-)
Type: pfam
Location: 31852 - 33084 (-)
Gene ID: MGYG000004510_7_19
Type: CAZyme
Location: 33128 - 34255 (-)
Type: CAZyme
Location: 33128 - 34255 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella absiana
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.