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Cluster: MGYG000004495_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004495_16 MGYG000004495_16_3 2966 3985 - GH43_31
CAZyme MGYG000004495_16 MGYG000004495_16_4 4011 5522 - GH51_1
CAZyme MGYG000004495_16 MGYG000004495_16_5 5604 6626 - GH43_3
pfam MGYG000004495_16 MGYG000004495_16_6 6691 8454 - SusD_RagB | SusD-like_3
TC MGYG000004495_16 MGYG000004495_16_7 8481 12005 - 1.B.14.6.1
STP MGYG000004495_16 MGYG000004495_16_8 12217 13218 - FecR
TF MGYG000004495_16 MGYG000004495_16_9 13280 13876 - GerE
TC MGYG000004495_16 MGYG000004495_16_10 13928 15031 - 3.A.1.132.3
CAZyme MGYG000004495_16 MGYG000004495_16_11 15416 17260 + GH115
Gene ID: MGYG000004495_16_3
Type: CAZyme
Location: 2966 - 3985 (-)
Gene ID: MGYG000004495_16_4
Type: CAZyme
Location: 4011 - 5522 (-)
Gene ID: MGYG000004495_16_5
Type: CAZyme
Location: 5604 - 6626 (-)
Gene ID: MGYG000004495_16_6
Type: pfam
Location: 6691 - 8454 (-)
Gene ID: MGYG000004495_16_7
Type: TC
Location: 8481 - 12005 (-)
Gene ID: MGYG000004495_16_8
Type: STP
Location: 12217 - 13218 (-)
Gene ID: MGYG000004495_16_9
Type: TF
Location: 13280 - 13876 (-)
Gene ID: MGYG000004495_16_10
Type: TC
Location: 13928 - 15031 (-)
Gene ID: MGYG000004495_16_11
Type: CAZyme
Location: 15416 - 17260 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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