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Cluster: MGYG000004495_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004495_10 MGYG000004495_10_25 36848 37651 - 4.F.1.3.2
pfam MGYG000004495_10 MGYG000004495_10_26 37684 38229 - GtrA_DPMS_TM
pfam MGYG000004495_10 MGYG000004495_10_27 38217 38780 - PgpA
TC MGYG000004495_10 MGYG000004495_10_28 38875 41499 + 1.B.14.6.14
TF MGYG000004495_10 MGYG000004495_10_29 41603 42241 + GerE
TF MGYG000004495_10 MGYG000004495_10_30 42561 43574 + LacI
CAZyme MGYG000004495_10 MGYG000004495_10_31 43697 46645 + GH31_4
CAZyme MGYG000004495_10 MGYG000004495_10_32 46744 49188 + GH2
Gene ID: MGYG000004495_10_25
Type: TC
Location: 36848 - 37651 (-)
Gene ID: MGYG000004495_10_26
Type: pfam
Location: 37684 - 38229 (-)
Gene ID: MGYG000004495_10_27
Type: pfam
Location: 38217 - 38780 (-)
Gene ID: MGYG000004495_10_28
Type: TC
Location: 38875 - 41499 (+)
Gene ID: MGYG000004495_10_29
Type: TF
Location: 41603 - 42241 (+)
Gene ID: MGYG000004495_10_30
Type: TF
Location: 42561 - 43574 (+)
Gene ID: MGYG000004495_10_31
Type: CAZyme
Location: 43697 - 46645 (+)
Gene ID: MGYG000004495_10_32
Type: CAZyme
Location: 46744 - 49188 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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