Cluster: MGYG000004493_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004493
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004493_2 | MGYG000004493_2_168 | 193657 | 194580 | + | GT111 |
| CAZyme | MGYG000004493_2 | MGYG000004493_2_169 | 194600 | 195499 | + | GT2 |
| pfam | MGYG000004493_2 | MGYG000004493_2_170 | 195496 | 196554 | + | EpsG |
| pfam | MGYG000004493_2 | MGYG000004493_2_171 | 196572 | 197633 | + | Glyco_trans_1_4 |
| CAZyme | MGYG000004493_2 | MGYG000004493_2_172 | 197630 | 198385 | + | GT2 |
| TC | MGYG000004493_2 | MGYG000004493_2_173 | 198410 | 200497 | - | 1.B.52.2.1 |
| TC | MGYG000004493_2 | MGYG000004493_2_174 | 200597 | 202240 | - | 3.D.10.1.2 |
Gene ID: MGYG000004493_2_168
Type: CAZyme
Location: 193657 - 194580 (+)
Type: CAZyme
Location: 193657 - 194580 (+)
Gene ID: MGYG000004493_2_169
Type: CAZyme
Location: 194600 - 195499 (+)
Type: CAZyme
Location: 194600 - 195499 (+)
Gene ID: MGYG000004493_2_170
Type: pfam
Location: 195496 - 196554 (+)
Type: pfam
Location: 195496 - 196554 (+)
Gene ID: MGYG000004493_2_171
Type: pfam
Location: 196572 - 197633 (+)
Type: pfam
Location: 196572 - 197633 (+)
Gene ID: MGYG000004493_2_172
Type: CAZyme
Location: 197630 - 198385 (+)
Type: CAZyme
Location: 197630 - 198385 (+)
Gene ID: MGYG000004493_2_173
Type: TC
Location: 198410 - 200497 (-)
Type: TC
Location: 198410 - 200497 (-)
Gene ID: MGYG000004493_2_174
Type: TC
Location: 200597 - 202240 (-)
Type: TC
Location: 200597 - 202240 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp945873775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.