Cluster: MGYG000004493_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004493
- CGC Family ID: CGCFAM_05907
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004493_2 | MGYG000004493_2_119 | 137881 | 138252 | - | 9.B.55.2.1 |
| TC | MGYG000004493_2 | MGYG000004493_2_120 | 138265 | 138993 | - | 3.A.1.122.14 |
| pfam | MGYG000004493_2 | MGYG000004493_2_121 | 139375 | 140952 | + | tRNA-synt_1c | Anticodon_2 |
| TC | MGYG000004493_2 | MGYG000004493_2_122 | 141353 | 142657 | + | 2.A.40.7.2 |
| TC | MGYG000004493_2 | MGYG000004493_2_123 | 142835 | 143332 | + | 3.A.11.1.4 |
| CAZyme | MGYG000004493_2 | MGYG000004493_2_124 | 143683 | 145680 | - | GH31_1 |
| CAZyme | MGYG000004493_2 | MGYG000004493_2_125 | 145771 | 147171 | - | GH13_28 |
Gene ID: MGYG000004493_2_119
Type: TC
Location: 137881 - 138252 (-)
Type: TC
Location: 137881 - 138252 (-)
Gene ID: MGYG000004493_2_120
Type: TC
Location: 138265 - 138993 (-)
Type: TC
Location: 138265 - 138993 (-)
Gene ID: MGYG000004493_2_121
Type: pfam
Location: 139375 - 140952 (+)
Type: pfam
Location: 139375 - 140952 (+)
Gene ID: MGYG000004493_2_122
Type: TC
Location: 141353 - 142657 (+)
Type: TC
Location: 141353 - 142657 (+)
Gene ID: MGYG000004493_2_123
Type: TC
Location: 142835 - 143332 (+)
Type: TC
Location: 142835 - 143332 (+)
Gene ID: MGYG000004493_2_124
Type: CAZyme
Location: 143683 - 145680 (-)
Type: CAZyme
Location: 143683 - 145680 (-)
Gene ID: MGYG000004493_2_125
Type: CAZyme
Location: 145771 - 147171 (-)
Type: CAZyme
Location: 145771 - 147171 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp945873775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.