Cluster: MGYG000004493_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004493
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004493_8 | MGYG000004493_8_41 | 45211 | 46200 | - | GH130_2 |
| CAZyme | MGYG000004493_8 | MGYG000004493_8_42 | 46219 | 47394 | - | GH130_1 |
| pfam | MGYG000004493_8 | MGYG000004493_8_43 | 47391 | 48572 | - | GlcNAc_2-epim |
| CAZyme | MGYG000004493_8 | MGYG000004493_8_44 | 48589 | 50718 | - | CBM27 | GH5_7 |
| TC | MGYG000004493_8 | MGYG000004493_8_45 | 50730 | 51887 | - | 3.A.1.1.18 |
| TC | MGYG000004493_8 | MGYG000004493_8_46 | 51912 | 52793 | - | 3.A.1.1.28 |
Gene ID: MGYG000004493_8_41
Type: CAZyme
Location: 45211 - 46200 (-)
Type: CAZyme
Location: 45211 - 46200 (-)
Gene ID: MGYG000004493_8_42
Type: CAZyme
Location: 46219 - 47394 (-)
Type: CAZyme
Location: 46219 - 47394 (-)
Gene ID: MGYG000004493_8_43
Type: pfam
Location: 47391 - 48572 (-)
Type: pfam
Location: 47391 - 48572 (-)
Gene ID: MGYG000004493_8_44
Type: CAZyme
Location: 48589 - 50718 (-)
Type: CAZyme
Location: 48589 - 50718 (-)
Gene ID: MGYG000004493_8_45
Type: TC
Location: 50730 - 51887 (-)
Type: TC
Location: 50730 - 51887 (-)
Gene ID: MGYG000004493_8_46
Type: TC
Location: 51912 - 52793 (-)
Type: TC
Location: 51912 - 52793 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp945873775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.