Cluster: MGYG000004493_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004493
- CGC Family ID: CGCFAM_01771
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004493_5 | MGYG000004493_5_56 | 60924 | 62663 | - | 3.A.1.120.6 |
| CAZyme | MGYG000004493_5 | MGYG000004493_5_57 | 62852 | 65032 | - | GH35 |
| NULL(UNKNOWN) | MGYG000004493_5 | MGYG000004493_5_58 | 65372 | 65596 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004493_5 | MGYG000004493_5_59 | 65584 | 66852 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004493_5 | MGYG000004493_5_60 | 66970 | 67812 | - | 3.A.1.1.6 |
| TC | MGYG000004493_5 | MGYG000004493_5_61 | 67809 | 69131 | - | 3.A.1.1.6 |
| TC | MGYG000004493_5 | MGYG000004493_5_62 | 69390 | 70589 | - | 3.A.1.1.2 |
Gene ID: MGYG000004493_5_56
Type: TC
Location: 60924 - 62663 (-)
Type: TC
Location: 60924 - 62663 (-)
Gene ID: MGYG000004493_5_57
Type: CAZyme
Location: 62852 - 65032 (-)
Type: CAZyme
Location: 62852 - 65032 (-)
Gene ID: MGYG000004493_5_58
Type:
Location: 65372 - 65596 (+)
Type:
Location: 65372 - 65596 (+)
Gene ID: MGYG000004493_5_59
Type:
Location: 65584 - 66852 (+)
Type:
Location: 65584 - 66852 (+)
Gene ID: MGYG000004493_5_60
Type: TC
Location: 66970 - 67812 (-)
Type: TC
Location: 66970 - 67812 (-)
Gene ID: MGYG000004493_5_61
Type: TC
Location: 67809 - 69131 (-)
Type: TC
Location: 67809 - 69131 (-)
Gene ID: MGYG000004493_5_62
Type: TC
Location: 69390 - 70589 (-)
Type: TC
Location: 69390 - 70589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp945873775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.