Cluster: MGYG000004493_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004493
- CGC Family ID: CGCFAM_01794
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004493_3 | MGYG000004493_3_175 | 194622 | 196217 | - | CBM91 | GH43_11 |
| TC | MGYG000004493_3 | MGYG000004493_3_176 | 196242 | 197081 | - | 3.A.1.1.34 |
| TC | MGYG000004493_3 | MGYG000004493_3_177 | 197097 | 198056 | - | 3.A.1.1.4 |
| STP | MGYG000004493_3 | MGYG000004493_3_178 | 198147 | 199451 | - | SBP_bac_1 |
| CAZyme | MGYG000004493_3 | MGYG000004493_3_179 | 199736 | 202162 | + | GH94 |
| STP | MGYG000004493_3 | MGYG000004493_3_180 | 202248 | 202934 | + | Pribosyltran |
| STP | MGYG000004493_3 | MGYG000004493_3_181 | 202935 | 203777 | + | Peripla_BP_2 |
| TC | MGYG000004493_3 | MGYG000004493_3_182 | 203786 | 204754 | + | 3.A.1.14.16 |
| TC | MGYG000004493_3 | MGYG000004493_3_183 | 204742 | 205512 | + | 3.A.1.13.2 |
| pfam | MGYG000004493_3 | MGYG000004493_3_184 | 205557 | 206303 | + | PseudoU_synth_2 |
| pfam | MGYG000004493_3 | MGYG000004493_3_185 | 206376 | 207026 | + | Cytidylate_kin2 |
| TC | MGYG000004493_3 | MGYG000004493_3_186 | 207021 | 208286 | - | 9.A.40.2.4 |
| TC | MGYG000004493_3 | MGYG000004493_3_187 | 208283 | 209557 | - | 9.A.40.2.1 |
Gene ID: MGYG000004493_3_175
Type: CAZyme
Location: 194622 - 196217 (-)
Type: CAZyme
Location: 194622 - 196217 (-)
Gene ID: MGYG000004493_3_176
Type: TC
Location: 196242 - 197081 (-)
Type: TC
Location: 196242 - 197081 (-)
Gene ID: MGYG000004493_3_177
Type: TC
Location: 197097 - 198056 (-)
Type: TC
Location: 197097 - 198056 (-)
Gene ID: MGYG000004493_3_178
Type: STP
Location: 198147 - 199451 (-)
Type: STP
Location: 198147 - 199451 (-)
Gene ID: MGYG000004493_3_179
Type: CAZyme
Location: 199736 - 202162 (+)
Type: CAZyme
Location: 199736 - 202162 (+)
Gene ID: MGYG000004493_3_180
Type: STP
Location: 202248 - 202934 (+)
Type: STP
Location: 202248 - 202934 (+)
Gene ID: MGYG000004493_3_181
Type: STP
Location: 202935 - 203777 (+)
Type: STP
Location: 202935 - 203777 (+)
Gene ID: MGYG000004493_3_182
Type: TC
Location: 203786 - 204754 (+)
Type: TC
Location: 203786 - 204754 (+)
Gene ID: MGYG000004493_3_183
Type: TC
Location: 204742 - 205512 (+)
Type: TC
Location: 204742 - 205512 (+)
Gene ID: MGYG000004493_3_184
Type: pfam
Location: 205557 - 206303 (+)
Type: pfam
Location: 205557 - 206303 (+)
Gene ID: MGYG000004493_3_185
Type: pfam
Location: 206376 - 207026 (+)
Type: pfam
Location: 206376 - 207026 (+)
Gene ID: MGYG000004493_3_186
Type: TC
Location: 207021 - 208286 (-)
Type: TC
Location: 207021 - 208286 (-)
Gene ID: MGYG000004493_3_187
Type: TC
Location: 208283 - 209557 (-)
Type: TC
Location: 208283 - 209557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp945873775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.