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Cluster: MGYG000004490_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004490_33 MGYG000004490_33_13 13521 14555 - 8.A.1.1.2
pfam MGYG000004490_33 MGYG000004490_33_14 14552 15871 - OEP | OEP
CAZyme MGYG000004490_33 MGYG000004490_33_15 16189 17727 - GH32
pfam MGYG000004490_33 MGYG000004490_33_16 17740 19242 - DUF4960
pfam MGYG000004490_33 MGYG000004490_33_17 19278 21014 - SusD_RagB | SusD-like_3
TC MGYG000004490_33 MGYG000004490_33_18 21049 24171 - 1.B.14.6.1
TF MGYG000004490_33 MGYG000004490_33_19 24380 27133 - HTH_AraC
CAZyme MGYG000004490_33 MGYG000004490_33_20 27377 29215 + GH32
TC MGYG000004490_33 MGYG000004490_33_21 29250 30437 + 2.A.1.7.17
Gene ID: MGYG000004490_33_13
Type: TC
Location: 13521 - 14555 (-)
Gene ID: MGYG000004490_33_14
Type: pfam
Location: 14552 - 15871 (-)
Gene ID: MGYG000004490_33_15
Type: CAZyme
Location: 16189 - 17727 (-)
Gene ID: MGYG000004490_33_16
Type: pfam
Location: 17740 - 19242 (-)
Gene ID: MGYG000004490_33_17
Type: pfam
Location: 19278 - 21014 (-)
Gene ID: MGYG000004490_33_18
Type: TC
Location: 21049 - 24171 (-)
Gene ID: MGYG000004490_33_19
Type: TF
Location: 24380 - 27133 (-)
Gene ID: MGYG000004490_33_20
Type: CAZyme
Location: 27377 - 29215 (+)
Gene ID: MGYG000004490_33_21
Type: TC
Location: 29250 - 30437 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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