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Cluster: MGYG000004490_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004490_19 MGYG000004490_19_33 31228 32874 - CE12 | CE12
pfam MGYG000004490_19 MGYG000004490_19_34 32886 33203 - rhaM
CAZyme MGYG000004490_19 MGYG000004490_19_35 33316 35757 + GH2
pfam MGYG000004490_19 MGYG000004490_19_36 35789 38416 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
CAZyme MGYG000004490_19 MGYG000004490_19_37 38425 39654 + CE15
pfam MGYG000004490_19 MGYG000004490_19_38 39651 40298 - OMP_b-brl_2
TC MGYG000004490_19 MGYG000004490_19_39 40416 41630 + 9.B.10.1.1
Gene ID: MGYG000004490_19_33
Type: CAZyme
Location: 31228 - 32874 (-)
Gene ID: MGYG000004490_19_34
Type: pfam
Location: 32886 - 33203 (-)
Gene ID: MGYG000004490_19_35
Type: CAZyme
Location: 33316 - 35757 (+)
Gene ID: MGYG000004490_19_36
Type: pfam
Location: 35789 - 38416 (+)
Gene ID: MGYG000004490_19_37
Type: CAZyme
Location: 38425 - 39654 (+)
Gene ID: MGYG000004490_19_38
Type: pfam
Location: 39651 - 40298 (-)
Gene ID: MGYG000004490_19_39
Type: TC
Location: 40416 - 41630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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