Cluster: MGYG000004487_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004487
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004487_27 | MGYG000004487_27_11 | 12028 | 12795 | - | GT2 |
| TC | MGYG000004487_27 | MGYG000004487_27_12 | 12917 | 14320 | - | 9.B.18.1.2 |
| TF | MGYG000004487_27 | MGYG000004487_27_13 | 14578 | 15342 | - | 0040266 |
| pfam | MGYG000004487_27 | MGYG000004487_27_14 | 15485 | 16834 | + | Na_H_antiporter |
| TC | MGYG000004487_27 | MGYG000004487_27_15 | 17122 | 18375 | + | 9.A.40.2.4 |
| TC | MGYG000004487_27 | MGYG000004487_27_16 | 18552 | 19910 | + | 2.A.40.2.1 |
Gene ID: MGYG000004487_27_11
Type: CAZyme
Location: 12028 - 12795 (-)
Type: CAZyme
Location: 12028 - 12795 (-)
Gene ID: MGYG000004487_27_12
Type: TC
Location: 12917 - 14320 (-)
Type: TC
Location: 12917 - 14320 (-)
Gene ID: MGYG000004487_27_13
Type: TF
Location: 14578 - 15342 (-)
Type: TF
Location: 14578 - 15342 (-)
Gene ID: MGYG000004487_27_14
Type: pfam
Location: 15485 - 16834 (+)
Type: pfam
Location: 15485 - 16834 (+)
Gene ID: MGYG000004487_27_15
Type: TC
Location: 17122 - 18375 (+)
Type: TC
Location: 17122 - 18375 (+)
Gene ID: MGYG000004487_27_16
Type: TC
Location: 18552 - 19910 (+)
Type: TC
Location: 18552 - 19910 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900547745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004487_27_11 | vegan > omnivore | 1.92121 | 0.01676 |
| MGYG000004487_27_11 | vegetarian > omnivore | 2.77862 | 0.00627 |
| MGYG000004487_27_12 | vegan > omnivore | 4.61698 | 0.01191 |
| MGYG000004487_27_12 | vegetarian > omnivore | 4.61248 | 0.00627 |
| MGYG000004487_27_14 | vegan > omnivore | 3.45629 | 0.01676 |
| MGYG000004487_27_14 | vegetarian > omnivore | 4.20290 | 0.00627 |