Cluster: MGYG000004487_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004487
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004487_3 | MGYG000004487_3_114 | 110829 | 112583 | - | 2.A.58.2.2 |
| pfam | MGYG000004487_3 | MGYG000004487_3_115 | 112780 | 113256 | + | Sm_multidrug_ex |
| pfam | MGYG000004487_3 | MGYG000004487_3_116 | 113316 | 114002 | - | RelA_SpoT |
| CAZyme | MGYG000004487_3 | MGYG000004487_3_117 | 114193 | 115320 | - | GT28 |
| pfam | MGYG000004487_3 | MGYG000004487_3_118 | 115295 | 115804 | - | CrtO |
| STP | MGYG000004487_3 | MGYG000004487_3_119 | 115801 | 116370 | - | TetR_N |
| TC | MGYG000004487_3 | MGYG000004487_3_120 | 116522 | 117628 | - | 9.A.23.1.1 |
Gene ID: MGYG000004487_3_114
Type: TC
Location: 110829 - 112583 (-)
Type: TC
Location: 110829 - 112583 (-)
Gene ID: MGYG000004487_3_115
Type: pfam
Location: 112780 - 113256 (+)
Type: pfam
Location: 112780 - 113256 (+)
Gene ID: MGYG000004487_3_116
Type: pfam
Location: 113316 - 114002 (-)
Type: pfam
Location: 113316 - 114002 (-)
Gene ID: MGYG000004487_3_117
Type: CAZyme
Location: 114193 - 115320 (-)
Type: CAZyme
Location: 114193 - 115320 (-)
Gene ID: MGYG000004487_3_118
Type: pfam
Location: 115295 - 115804 (-)
Type: pfam
Location: 115295 - 115804 (-)
Gene ID: MGYG000004487_3_119
Type: STP
Location: 115801 - 116370 (-)
Type: STP
Location: 115801 - 116370 (-)
Gene ID: MGYG000004487_3_120
Type: TC
Location: 116522 - 117628 (-)
Type: TC
Location: 116522 - 117628 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900547745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004487_3_117 | vegan > omnivore | 1.16702 | 0.01676 |
| MGYG000004487_3_117 | vegetarian > omnivore | 1.97143 | 0.00627 |
| MGYG000004487_3_118 | vegetarian > omnivore | 1.31432 | 0.00627 |
| MGYG000004487_3_119 | vegan > omnivore | 2.71561 | 0.01676 |
| MGYG000004487_3_119 | vegetarian > omnivore | 3.46712 | 0.00627 |