Cluster: MGYG000004487_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004487
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004487_1 | MGYG000004487_1_61 | 66930 | 67769 | + | 9.B.157.1.2 |
| NULL(UNKNOWN) | MGYG000004487_1 | MGYG000004487_1_62 | 67789 | 68298 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004487_1 | MGYG000004487_1_63 | 68315 | 70345 | + | Transpeptidase | PBP_dimer |
| CAZyme | MGYG000004487_1 | MGYG000004487_1_64 | 70360 | 72201 | + | GH13_39 |
Gene ID: MGYG000004487_1_61
Type: TC
Location: 66930 - 67769 (+)
Type: TC
Location: 66930 - 67769 (+)
Gene ID: MGYG000004487_1_62
Type:
Location: 67789 - 68298 (+)
Type:
Location: 67789 - 68298 (+)
Gene ID: MGYG000004487_1_63
Type: pfam
Location: 68315 - 70345 (+)
Type: pfam
Location: 68315 - 70345 (+)
Gene ID: MGYG000004487_1_64
Type: CAZyme
Location: 70360 - 72201 (+)
Type: CAZyme
Location: 70360 - 72201 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900547745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004487_1_61 | vegan > omnivore | 1.24794 | 0.01676 |
| MGYG000004487_1_61 | vegetarian > omnivore | 1.83034 | 0.00627 |
| MGYG000004487_1_62 | vegan > omnivore | 3.55124 | 0.01676 |
| MGYG000004487_1_62 | vegetarian > omnivore | 4.05572 | 0.00627 |