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Cluster: MGYG000004486_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004486_20 MGYG000004486_20_21 19834 20658 - 3.A.1.132.3
TC MGYG000004486_20 MGYG000004486_20_22 20968 21483 - 2.A.87.3.1
pfam MGYG000004486_20 MGYG000004486_20_23 21476 21838 - NusG_II
TC MGYG000004486_20 MGYG000004486_20_24 21932 23617 + 2.A.103.1.6
pfam MGYG000004486_20 MGYG000004486_20_25 23614 24903 + Transpeptidase
TC MGYG000004486_20 MGYG000004486_20_26 24920 26788 + 3.A.1.121.4
pfam MGYG000004486_20 MGYG000004486_20_27 26785 27510 + DUF218
CAZyme MGYG000004486_20 MGYG000004486_20_28 27862 28635 + CE4
Gene ID: MGYG000004486_20_21
Type: TC
Location: 19834 - 20658 (-)
Gene ID: MGYG000004486_20_22
Type: TC
Location: 20968 - 21483 (-)
Gene ID: MGYG000004486_20_23
Type: pfam
Location: 21476 - 21838 (-)
Gene ID: MGYG000004486_20_24
Type: TC
Location: 21932 - 23617 (+)
Gene ID: MGYG000004486_20_25
Type: pfam
Location: 23614 - 24903 (+)
Gene ID: MGYG000004486_20_26
Type: TC
Location: 24920 - 26788 (+)
Gene ID: MGYG000004486_20_27
Type: pfam
Location: 26785 - 27510 (+)
Gene ID: MGYG000004486_20_28
Type: CAZyme
Location: 27862 - 28635 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004486_20_26 vegetarian > vegan 1.18469 0.00699

🧭 Explore Read Mapping of CGC

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