Cluster: MGYG000004482_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004482
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004482_20 | MGYG000004482_20_4 | 3306 | 4025 | - | CE4 |
| TF | MGYG000004482_20 | MGYG000004482_20_5 | 4202 | 5089 | + | HTH_1 |
| pfam | MGYG000004482_20 | MGYG000004482_20_6 | 5159 | 6559 | + | Acetyltransf_1 | LPG_synthase_C | Acetyltransf_3 |
| TC | MGYG000004482_20 | MGYG000004482_20_7 | 6698 | 8113 | + | 9.A.11.1.1 |
Gene ID: MGYG000004482_20_4
Type: CAZyme
Location: 3306 - 4025 (-)
Type: CAZyme
Location: 3306 - 4025 (-)
Gene ID: MGYG000004482_20_5
Type: TF
Location: 4202 - 5089 (+)
Type: TF
Location: 4202 - 5089 (+)
Gene ID: MGYG000004482_20_6
Type: pfam
Location: 5159 - 6559 (+)
Type: pfam
Location: 5159 - 6559 (+)
Gene ID: MGYG000004482_20_7
Type: TC
Location: 6698 - 8113 (+)
Type: TC
Location: 6698 - 8113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900546295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004482_20_4 | vegetarian > vegan | 1.33353 | 0.00012 |
| MGYG000004482_20_5 | vegetarian > vegan | 1.28314 | 0.00012 |
| MGYG000004482_20_6 | vegetarian > vegan | 1.46349 | 0.00012 |
| MGYG000004482_20_7 | vegetarian > vegan | 1.07292 | 0.00012 |