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Cluster: MGYG000004480_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004480_2 MGYG000004480_2_118 146357 146695 - 4.A.3.1.2
TF MGYG000004480_2 MGYG000004480_2_119 146910 147914 - LacI
TC MGYG000004480_2 MGYG000004480_2_120 148272 150047 + 4.A.3.1.1
CAZyme MGYG000004480_2 MGYG000004480_2_121 150114 151553 + GH1
TF MGYG000004480_2 MGYG000004480_2_122 151821 152858 - LacI
CAZyme MGYG000004480_2 MGYG000004480_2_123 153200 154642 + GH1
TC MGYG000004480_2 MGYG000004480_2_124 154819 156579 + 4.A.3.1.1
TF MGYG000004480_2 MGYG000004480_2_125 156993 158003 - LacI
TC MGYG000004480_2 MGYG000004480_2_126 158278 160056 + 4.A.3.1.1
CAZyme MGYG000004480_2 MGYG000004480_2_127 160133 161554 + GH1
Gene ID: MGYG000004480_2_118
Type: TC
Location: 146357 - 146695 (-)
Gene ID: MGYG000004480_2_119
Type: TF
Location: 146910 - 147914 (-)
Gene ID: MGYG000004480_2_120
Type: TC
Location: 148272 - 150047 (+)
Gene ID: MGYG000004480_2_121
Type: CAZyme
Location: 150114 - 151553 (+)
Gene ID: MGYG000004480_2_122
Type: TF
Location: 151821 - 152858 (-)
Gene ID: MGYG000004480_2_123
Type: CAZyme
Location: 153200 - 154642 (+)
Gene ID: MGYG000004480_2_124
Type: TC
Location: 154819 - 156579 (+)
Gene ID: MGYG000004480_2_125
Type: TF
Location: 156993 - 158003 (-)
Gene ID: MGYG000004480_2_126
Type: TC
Location: 158278 - 160056 (+)
Gene ID: MGYG000004480_2_127
Type: CAZyme
Location: 160133 - 161554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004480_2_122 vegetarian > omnivore 1.06527 0.00585

🧭 Explore Read Mapping of CGC

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