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Cluster: MGYG000004480_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004480_14 MGYG000004480_14_4 1902 2891 - GT2
CAZyme MGYG000004480_14 MGYG000004480_14_5 2910 3971 - GT2
pfam MGYG000004480_14 MGYG000004480_14_6 4024 5121 - Epimerase_2
TC MGYG000004480_14 MGYG000004480_14_7 5118 6662 - 2.A.66.1.40
pfam MGYG000004480_14 MGYG000004480_14_8 6682 8256 - Glycos_transf_2 | Glyco_tranf_2_3
CAZyme MGYG000004480_14 MGYG000004480_14_9 8286 10739 - GH73
CAZyme MGYG000004480_14 MGYG000004480_14_10 11087 12187 + GT2
NULL(UNKNOWN) MGYG000004480_14 MGYG000004480_14_11 12192 12341 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004480_14 MGYG000004480_14_12 12338 13693 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004480_14 MGYG000004480_14_13 13916 14935 + GT2
Gene ID: MGYG000004480_14_4
Type: CAZyme
Location: 1902 - 2891 (-)
Gene ID: MGYG000004480_14_5
Type: CAZyme
Location: 2910 - 3971 (-)
Gene ID: MGYG000004480_14_6
Type: pfam
Location: 4024 - 5121 (-)
Gene ID: MGYG000004480_14_7
Type: TC
Location: 5118 - 6662 (-)
Gene ID: MGYG000004480_14_8
Type: pfam
Location: 6682 - 8256 (-)
Gene ID: MGYG000004480_14_9
Type: CAZyme
Location: 8286 - 10739 (-)
Gene ID: MGYG000004480_14_10
Type: CAZyme
Location: 11087 - 12187 (+)
Gene ID: MGYG000004480_14_11
Type:
Location: 12192 - 12341 (+)
Gene ID: MGYG000004480_14_12
Type:
Location: 12338 - 13693 (-)
Gene ID: MGYG000004480_14_13
Type: CAZyme
Location: 13916 - 14935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004480_14_10 vegan > omnivore 17.72037 0.01332

🧭 Explore Read Mapping of CGC

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