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Cluster: MGYG000004467_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004467_4 MGYG000004467_4_53 53677 55371 + 4.A.3.1.1
STP MGYG000004467_4 MGYG000004467_4_54 55534 55863 + DeoRC
pfam MGYG000004467_4 MGYG000004467_4_55 55912 57144 - Fic
CAZyme MGYG000004467_4 MGYG000004467_4_56 57511 58932 - GH1
TC MGYG000004467_4 MGYG000004467_4_57 59008 60786 - 4.A.3.1.1
TF MGYG000004467_4 MGYG000004467_4_58 61062 62072 + LacI
TC MGYG000004467_4 MGYG000004467_4_59 62486 64246 - 4.A.3.1.1
CAZyme MGYG000004467_4 MGYG000004467_4_60 64423 65865 - GH1
TF MGYG000004467_4 MGYG000004467_4_61 66207 67244 + LacI
CAZyme MGYG000004467_4 MGYG000004467_4_62 67512 68951 - GH1
TC MGYG000004467_4 MGYG000004467_4_63 69018 70784 - 4.A.3.1.1
TF MGYG000004467_4 MGYG000004467_4_64 71142 72146 + LacI
TC MGYG000004467_4 MGYG000004467_4_65 72361 72699 + 4.A.3.1.2
Gene ID: MGYG000004467_4_53
Type: TC
Location: 53677 - 55371 (+)
Gene ID: MGYG000004467_4_54
Type: STP
Location: 55534 - 55863 (+)
Gene ID: MGYG000004467_4_55
Type: pfam
Location: 55912 - 57144 (-)
Gene ID: MGYG000004467_4_56
Type: CAZyme
Location: 57511 - 58932 (-)
Gene ID: MGYG000004467_4_57
Type: TC
Location: 59008 - 60786 (-)
Gene ID: MGYG000004467_4_58
Type: TF
Location: 61062 - 62072 (+)
Gene ID: MGYG000004467_4_59
Type: TC
Location: 62486 - 64246 (-)
Gene ID: MGYG000004467_4_60
Type: CAZyme
Location: 64423 - 65865 (-)
Gene ID: MGYG000004467_4_61
Type: TF
Location: 66207 - 67244 (+)
Gene ID: MGYG000004467_4_62
Type: CAZyme
Location: 67512 - 68951 (-)
Gene ID: MGYG000004467_4_63
Type: TC
Location: 69018 - 70784 (-)
Gene ID: MGYG000004467_4_64
Type: TF
Location: 71142 - 72146 (+)
Gene ID: MGYG000004467_4_65
Type: TC
Location: 72361 - 72699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004467_4_61 vegetarian > omnivore 1.03060 0.02677

🧭 Explore Read Mapping of CGC

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