Cluster: MGYG000004466_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004466
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004466_49 | MGYG000004466_49_6 | 5813 | 6478 | + | 9.B.18.1.2 |
| CAZyme | MGYG000004466_49 | MGYG000004466_49_7 | 6479 | 7327 | + | GT2 |
| CAZyme | MGYG000004466_49 | MGYG000004466_49_8 | 7428 | 8492 | + | GT4 |
| CAZyme | MGYG000004466_49 | MGYG000004466_49_9 | 8533 | 9603 | + | GT4 |
| pfam | MGYG000004466_49 | MGYG000004466_49_10 | 9606 | 10907 | + | Wzy_C |
| CAZyme | MGYG000004466_49 | MGYG000004466_49_11 | 10876 | 11811 | + | GT2 |
Gene ID: MGYG000004466_49_6
Type: TC
Location: 5813 - 6478 (+)
Type: TC
Location: 5813 - 6478 (+)
Gene ID: MGYG000004466_49_7
Type: CAZyme
Location: 6479 - 7327 (+)
Type: CAZyme
Location: 6479 - 7327 (+)
Gene ID: MGYG000004466_49_8
Type: CAZyme
Location: 7428 - 8492 (+)
Type: CAZyme
Location: 7428 - 8492 (+)
Gene ID: MGYG000004466_49_9
Type: CAZyme
Location: 8533 - 9603 (+)
Type: CAZyme
Location: 8533 - 9603 (+)
Gene ID: MGYG000004466_49_10
Type: pfam
Location: 9606 - 10907 (+)
Type: pfam
Location: 9606 - 10907 (+)
Gene ID: MGYG000004466_49_11
Type: CAZyme
Location: 10876 - 11811 (+)
Type: CAZyme
Location: 10876 - 11811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902495545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.