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Cluster: MGYG000004445_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004445_23 MGYG000004445_23_8 5892 7664 + 3.A.2.2.2
TC MGYG000004445_23 MGYG000004445_23_9 7657 9039 + 3.A.2.2.2
TC MGYG000004445_23 MGYG000004445_23_10 9061 9708 + 3.A.2.2.2
TF MGYG000004445_23 MGYG000004445_23_11 10091 11281 - HTH_AraC | HTH_AraC
TC MGYG000004445_23 MGYG000004445_23_12 11483 13006 + 3.A.1.2.20
TC MGYG000004445_23 MGYG000004445_23_13 13018 14007 + 3.A.1.2.1
pfam MGYG000004445_23 MGYG000004445_23_14 14036 15196 + Peripla_BP_4
pfam MGYG000004445_23 MGYG000004445_23_15 15263 16264 + BPD_transp_2
CAZyme MGYG000004445_23 MGYG000004445_23_16 16257 17954 + GH3
CAZyme MGYG000004445_23 MGYG000004445_23_17 17951 20629 + CBM67 | GH78
CAZyme MGYG000004445_23 MGYG000004445_23_18 20931 22259 + GH30_1
Gene ID: MGYG000004445_23_8
Type: TC
Location: 5892 - 7664 (+)
Gene ID: MGYG000004445_23_9
Type: TC
Location: 7657 - 9039 (+)
Gene ID: MGYG000004445_23_10
Type: TC
Location: 9061 - 9708 (+)
Gene ID: MGYG000004445_23_11
Type: TF
Location: 10091 - 11281 (-)
Gene ID: MGYG000004445_23_12
Type: TC
Location: 11483 - 13006 (+)
Gene ID: MGYG000004445_23_13
Type: TC
Location: 13018 - 14007 (+)
Gene ID: MGYG000004445_23_14
Type: pfam
Location: 14036 - 15196 (+)
Gene ID: MGYG000004445_23_15
Type: pfam
Location: 15263 - 16264 (+)
Gene ID: MGYG000004445_23_16
Type: CAZyme
Location: 16257 - 17954 (+)
Gene ID: MGYG000004445_23_17
Type: CAZyme
Location: 17951 - 20629 (+)
Gene ID: MGYG000004445_23_18
Type: CAZyme
Location: 20931 - 22259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004445_23_9 vegetarian > vegan 1.38253 0.00855

🧭 Explore Read Mapping of CGC

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