Cluster: MGYG000004443_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004443
- CGC Family ID: CGCFAM_00069
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004443_4 | MGYG000004443_4_26 | 28977 | 30638 | - | 4.C.1.1.4 |
| pfam | MGYG000004443_4 | MGYG000004443_4_27 | 30859 | 32184 | + | UPF0004 | Radical_SAM |
| pfam | MGYG000004443_4 | MGYG000004443_4_28 | 32187 | 33083 | + | Lip_A_acyltrans |
| CAZyme | MGYG000004443_4 | MGYG000004443_4_29 | 33080 | 34081 | + | GT2 |
| TF | MGYG000004443_4 | MGYG000004443_4_30 | 34236 | 34811 | + | HTH_3 |
| TC | MGYG000004443_4 | MGYG000004443_4_31 | 34832 | 36481 | + | 4.C.1.1.4 |
| CAZyme | MGYG000004443_4 | MGYG000004443_4_32 | 36570 | 38951 | + | GH95 |
Gene ID: MGYG000004443_4_26
Type: TC
Location: 28977 - 30638 (-)
Type: TC
Location: 28977 - 30638 (-)
Gene ID: MGYG000004443_4_27
Type: pfam
Location: 30859 - 32184 (+)
Type: pfam
Location: 30859 - 32184 (+)
Gene ID: MGYG000004443_4_28
Type: pfam
Location: 32187 - 33083 (+)
Type: pfam
Location: 32187 - 33083 (+)
Gene ID: MGYG000004443_4_29
Type: CAZyme
Location: 33080 - 34081 (+)
Type: CAZyme
Location: 33080 - 34081 (+)
Gene ID: MGYG000004443_4_30
Type: TF
Location: 34236 - 34811 (+)
Type: TF
Location: 34236 - 34811 (+)
Gene ID: MGYG000004443_4_31
Type: TC
Location: 34832 - 36481 (+)
Type: TC
Location: 34832 - 36481 (+)
Gene ID: MGYG000004443_4_32
Type: CAZyme
Location: 36570 - 38951 (+)
Type: CAZyme
Location: 36570 - 38951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CHK158-818
Genus
Gallibacteroides
Species
Gallibacteroides avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.