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Cluster: MGYG000004430_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004430_27 MGYG000004430_27_17 16368 17588 + GH27
TC MGYG000004430_27 MGYG000004430_27_18 17600 21001 + 1.B.14.6.1
pfam MGYG000004430_27 MGYG000004430_27_19 21014 22633 + SusD_RagB | SusD-like_3
CAZyme MGYG000004430_27 MGYG000004430_27_20 22641 23660 + GH43_18
NULL(UNKNOWN) MGYG000004430_27 MGYG000004430_27_21 23657 25666 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004430_27 MGYG000004430_27_22 25686 27203 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004430_27 MGYG000004430_27_23 27294 29090 + GH2
CAZyme MGYG000004430_27 MGYG000004430_27_24 29087 31342 + GH3
Gene ID: MGYG000004430_27_17
Type: CAZyme
Location: 16368 - 17588 (+)
Gene ID: MGYG000004430_27_18
Type: TC
Location: 17600 - 21001 (+)
Gene ID: MGYG000004430_27_19
Type: pfam
Location: 21014 - 22633 (+)
Gene ID: MGYG000004430_27_20
Type: CAZyme
Location: 22641 - 23660 (+)
Gene ID: MGYG000004430_27_21
Type:
Location: 23657 - 25666 (+)
Gene ID: MGYG000004430_27_22
Type:
Location: 25686 - 27203 (+)
Gene ID: MGYG000004430_27_23
Type: CAZyme
Location: 27294 - 29090 (+)
Gene ID: MGYG000004430_27_24
Type: CAZyme
Location: 29087 - 31342 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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