Cluster: MGYG000004415_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004415
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004415_9 | MGYG000004415_9_16 | 13132 | 14151 | + | GH109 |
| pfam | MGYG000004415_9 | MGYG000004415_9_17 | 14281 | 15147 | + | AP_endonuc_2 |
| TC | MGYG000004415_9 | MGYG000004415_9_18 | 15295 | 16155 | + | 3.A.1.3.15 |
| TC | MGYG000004415_9 | MGYG000004415_9_19 | 16274 | 17635 | + | 3.A.1.3.16 |
| TC | MGYG000004415_9 | MGYG000004415_9_20 | 17648 | 18400 | + | 3.A.1.3.20 |
Gene ID: MGYG000004415_9_16
Type: CAZyme
Location: 13132 - 14151 (+)
Type: CAZyme
Location: 13132 - 14151 (+)
Gene ID: MGYG000004415_9_17
Type: pfam
Location: 14281 - 15147 (+)
Type: pfam
Location: 14281 - 15147 (+)
Gene ID: MGYG000004415_9_18
Type: TC
Location: 15295 - 16155 (+)
Type: TC
Location: 15295 - 16155 (+)
Gene ID: MGYG000004415_9_19
Type: TC
Location: 16274 - 17635 (+)
Type: TC
Location: 16274 - 17635 (+)
Gene ID: MGYG000004415_9_20
Type: TC
Location: 17648 - 18400 (+)
Type: TC
Location: 17648 - 18400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902495155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.