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Cluster: MGYG000004412_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004412_12 MGYG000004412_12_38 36959 38308 + 2.A.66.1.33
NULL(UNKNOWN) MGYG000004412_12 MGYG000004412_12_39 38200 38424 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004412_12 MGYG000004412_12_40 38508 38774 + DUF6110
TC MGYG000004412_12 MGYG000004412_12_41 38777 40888 + 3.A.3.32.3
NULL(UNKNOWN) MGYG000004412_12 MGYG000004412_12_42 40965 41198 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004412_12 MGYG000004412_12_43 41256 41825 - CE4
STP MGYG000004412_12 MGYG000004412_12_44 41936 43363 - GGDEF
STP MGYG000004412_12 MGYG000004412_12_45 43372 45270 - EAL
CAZyme MGYG000004412_12 MGYG000004412_12_46 45286 46689 - GT2 | GT2
Gene ID: MGYG000004412_12_38
Type: TC
Location: 36959 - 38308 (+)
Gene ID: MGYG000004412_12_39
Type:
Location: 38200 - 38424 (-)
Gene ID: MGYG000004412_12_40
Type: pfam
Location: 38508 - 38774 (+)
Gene ID: MGYG000004412_12_41
Type: TC
Location: 38777 - 40888 (+)
Gene ID: MGYG000004412_12_42
Type:
Location: 40965 - 41198 (-)
Gene ID: MGYG000004412_12_43
Type: CAZyme
Location: 41256 - 41825 (-)
Gene ID: MGYG000004412_12_44
Type: STP
Location: 41936 - 43363 (-)
Gene ID: MGYG000004412_12_45
Type: STP
Location: 43372 - 45270 (-)
Gene ID: MGYG000004412_12_46
Type: CAZyme
Location: 45286 - 46689 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004412_12_42 vegetarian > omnivore 2.37805 0.00933
MGYG000004412_12_46 vegetarian > vegan 1.53412 0.00141

🧭 Explore Read Mapping of CGC

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