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Cluster: MGYG000004412_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004412_10 MGYG000004412_10_12 11914 13056 + 9.B.10.1.1
pfam MGYG000004412_10 MGYG000004412_10_13 13069 13998 + cobW | DUF1980_C
pfam MGYG000004412_10 MGYG000004412_10_14 14572 16311 - Cadherin-like
CAZyme MGYG000004412_10 MGYG000004412_10_15 16326 18239 - GH73
pfam MGYG000004412_10 MGYG000004412_10_16 18411 19403 - NMT1 | NMT1_2
TC MGYG000004412_10 MGYG000004412_10_17 19400 20209 - 3.A.1.17.3
TC MGYG000004412_10 MGYG000004412_10_18 20202 20957 - 3.A.1.17.13
pfam MGYG000004412_10 MGYG000004412_10_19 21306 22475 - Acetyltransf_1
CAZyme MGYG000004412_10 MGYG000004412_10_20 22693 23724 + GH179
pfam MGYG000004412_10 MGYG000004412_10_21 24373 25422 + Gp_dh_N | Gp_dh_C
TC MGYG000004412_10 MGYG000004412_10_22 25721 29617 + 2.A.6.3.6
Gene ID: MGYG000004412_10_12
Type: TC
Location: 11914 - 13056 (+)
Gene ID: MGYG000004412_10_13
Type: pfam
Location: 13069 - 13998 (+)
Gene ID: MGYG000004412_10_14
Type: pfam
Location: 14572 - 16311 (-)
Gene ID: MGYG000004412_10_15
Type: CAZyme
Location: 16326 - 18239 (-)
Gene ID: MGYG000004412_10_16
Type: pfam
Location: 18411 - 19403 (-)
Gene ID: MGYG000004412_10_17
Type: TC
Location: 19400 - 20209 (-)
Gene ID: MGYG000004412_10_18
Type: TC
Location: 20202 - 20957 (-)
Gene ID: MGYG000004412_10_19
Type: pfam
Location: 21306 - 22475 (-)
Gene ID: MGYG000004412_10_20
Type: CAZyme
Location: 22693 - 23724 (+)
Gene ID: MGYG000004412_10_21
Type: pfam
Location: 24373 - 25422 (+)
Gene ID: MGYG000004412_10_22
Type: TC
Location: 25721 - 29617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004412_10_18 vegetarian > omnivore 1.07121 0.00933

🧭 Explore Read Mapping of CGC

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