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Cluster: MGYG000004407_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004407_4 MGYG000004407_4_19 19191 19529 - 4.A.3.1.2
TF MGYG000004407_4 MGYG000004407_4_20 19744 20748 - LacI
TC MGYG000004407_4 MGYG000004407_4_21 21106 22872 + 4.A.3.1.1
CAZyme MGYG000004407_4 MGYG000004407_4_22 22939 24378 + GH1
TF MGYG000004407_4 MGYG000004407_4_23 24655 25692 - LacI
CAZyme MGYG000004407_4 MGYG000004407_4_24 26034 27476 + GH1
TC MGYG000004407_4 MGYG000004407_4_25 27652 29412 + 4.A.3.1.1
TF MGYG000004407_4 MGYG000004407_4_26 29826 30836 - LacI
TC MGYG000004407_4 MGYG000004407_4_27 31112 32890 + 4.A.3.1.1
CAZyme MGYG000004407_4 MGYG000004407_4_28 32968 34389 + GH1
pfam MGYG000004407_4 MGYG000004407_4_29 34757 35989 + Fic
STP MGYG000004407_4 MGYG000004407_4_30 35986 36366 - DeoRC
TC MGYG000004407_4 MGYG000004407_4_31 36529 38223 - 4.A.3.1.1
Gene ID: MGYG000004407_4_19
Type: TC
Location: 19191 - 19529 (-)
Gene ID: MGYG000004407_4_20
Type: TF
Location: 19744 - 20748 (-)
Gene ID: MGYG000004407_4_21
Type: TC
Location: 21106 - 22872 (+)
Gene ID: MGYG000004407_4_22
Type: CAZyme
Location: 22939 - 24378 (+)
Gene ID: MGYG000004407_4_23
Type: TF
Location: 24655 - 25692 (-)
Gene ID: MGYG000004407_4_24
Type: CAZyme
Location: 26034 - 27476 (+)
Gene ID: MGYG000004407_4_25
Type: TC
Location: 27652 - 29412 (+)
Gene ID: MGYG000004407_4_26
Type: TF
Location: 29826 - 30836 (-)
Gene ID: MGYG000004407_4_27
Type: TC
Location: 31112 - 32890 (+)
Gene ID: MGYG000004407_4_28
Type: CAZyme
Location: 32968 - 34389 (+)
Gene ID: MGYG000004407_4_29
Type: pfam
Location: 34757 - 35989 (+)
Gene ID: MGYG000004407_4_30
Type: STP
Location: 35986 - 36366 (-)
Gene ID: MGYG000004407_4_31
Type: TC
Location: 36529 - 38223 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004407_4_23 vegetarian > omnivore 1.09346 0.02242

🧭 Explore Read Mapping of CGC

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