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Cluster: MGYG000004402_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004402_3 MGYG000004402_3_10 17592 20795 - 1.B.14.6.1
CAZyme MGYG000004402_3 MGYG000004402_3_11 20978 22633 + GH29
CAZyme MGYG000004402_3 MGYG000004402_3_12 22706 25381 + GH31_4
pfam MGYG000004402_3 MGYG000004402_3_13 25537 26889 - Mur_ligase_C | Mur_ligase_M
CAZyme MGYG000004402_3 MGYG000004402_3_14 27044 30514 + GH31_15
Gene ID: MGYG000004402_3_10
Type: TC
Location: 17592 - 20795 (-)
Gene ID: MGYG000004402_3_11
Type: CAZyme
Location: 20978 - 22633 (+)
Gene ID: MGYG000004402_3_12
Type: CAZyme
Location: 22706 - 25381 (+)
Gene ID: MGYG000004402_3_13
Type: pfam
Location: 25537 - 26889 (-)
Gene ID: MGYG000004402_3_14
Type: CAZyme
Location: 27044 - 30514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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