Cluster: MGYG000004381_CGC16
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004381
- CGC Family ID: CGCFAM_02356
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004381_5 | MGYG000004381_5_92 | 103822 | 105843 | - | GH25 |
| pfam | MGYG000004381_5 | MGYG000004381_5_93 | 105880 | 106983 | - | Acyl_transf_3 |
| CAZyme | MGYG000004381_5 | MGYG000004381_5_94 | 106980 | 107981 | - | GT2 |
| pfam | MGYG000004381_5 | MGYG000004381_5_95 | 108033 | 109145 | - | Amino_oxidase | GLF | NAD_binding_8 |
| TC | MGYG000004381_5 | MGYG000004381_5_96 | 109165 | 110616 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | MGYG000004381_5 | MGYG000004381_5_97 | 110621 | 111868 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004381_5 | MGYG000004381_5_98 | 111923 | 112984 | - | GT113 |
| CAZyme | MGYG000004381_5 | MGYG000004381_5_99 | 112984 | 114108 | - | GT4 |
| CAZyme | MGYG000004381_5 | MGYG000004381_5_100 | 114111 | 115220 | - | GT4 |
| TC | MGYG000004381_5 | MGYG000004381_5_101 | 115259 | 116689 | - | 9.B.18.1.2 |
| CAZyme | MGYG000004381_5 | MGYG000004381_5_102 | 116745 | 117503 | - | GT111 |
| pfam | MGYG000004381_5 | MGYG000004381_5_103 | 117518 | 118522 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | MGYG000004381_5 | MGYG000004381_5_104 | 118648 | 120912 | - | FtsX | FtsX |
| TC | MGYG000004381_5 | MGYG000004381_5_105 | 120932 | 121630 | - | 3.A.1.134.3 |
| TF | MGYG000004381_5 | MGYG000004381_5_106 | 121716 | 122279 | - | FUR |
| TC | MGYG000004381_5 | MGYG000004381_5_107 | 122445 | 124937 | - | 9.A.8.1.6 |
Gene ID: MGYG000004381_5_92
Type: CAZyme
Location: 103822 - 105843 (-)
Type: CAZyme
Location: 103822 - 105843 (-)
Gene ID: MGYG000004381_5_93
Type: pfam
Location: 105880 - 106983 (-)
Type: pfam
Location: 105880 - 106983 (-)
Gene ID: MGYG000004381_5_94
Type: CAZyme
Location: 106980 - 107981 (-)
Type: CAZyme
Location: 106980 - 107981 (-)
Gene ID: MGYG000004381_5_95
Type: pfam
Location: 108033 - 109145 (-)
Type: pfam
Location: 108033 - 109145 (-)
Gene ID: MGYG000004381_5_96
Type: TC
Location: 109165 - 110616 (-)
Type: TC
Location: 109165 - 110616 (-)
Gene ID: MGYG000004381_5_97
Type:
Location: 110621 - 111868 (-)
Type:
Location: 110621 - 111868 (-)
Gene ID: MGYG000004381_5_98
Type: CAZyme
Location: 111923 - 112984 (-)
Type: CAZyme
Location: 111923 - 112984 (-)
Gene ID: MGYG000004381_5_99
Type: CAZyme
Location: 112984 - 114108 (-)
Type: CAZyme
Location: 112984 - 114108 (-)
Gene ID: MGYG000004381_5_100
Type: CAZyme
Location: 114111 - 115220 (-)
Type: CAZyme
Location: 114111 - 115220 (-)
Gene ID: MGYG000004381_5_101
Type: TC
Location: 115259 - 116689 (-)
Type: TC
Location: 115259 - 116689 (-)
Gene ID: MGYG000004381_5_102
Type: CAZyme
Location: 116745 - 117503 (-)
Type: CAZyme
Location: 116745 - 117503 (-)
Gene ID: MGYG000004381_5_103
Type: pfam
Location: 117518 - 118522 (-)
Type: pfam
Location: 117518 - 118522 (-)
Gene ID: MGYG000004381_5_104
Type: pfam
Location: 118648 - 120912 (-)
Type: pfam
Location: 118648 - 120912 (-)
Gene ID: MGYG000004381_5_105
Type: TC
Location: 120932 - 121630 (-)
Type: TC
Location: 120932 - 121630 (-)
Gene ID: MGYG000004381_5_106
Type: TF
Location: 121716 - 122279 (-)
Type: TF
Location: 121716 - 122279 (-)
Gene ID: MGYG000004381_5_107
Type: TC
Location: 122445 - 124937 (-)
Type: TC
Location: 122445 - 124937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900772425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.