Cluster: MGYG000004381_CGC10
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004381
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004381_3 | MGYG000004381_3_47 | 38958 | 40748 | + | 3.A.1.21.1 |
| TC | MGYG000004381_3 | MGYG000004381_3_48 | 40750 | 42483 | + | 3.A.1.135.5 |
| pfam | MGYG000004381_3 | MGYG000004381_3_49 | 42918 | 43889 | + | ApbA | ApbA_C |
| TC | MGYG000004381_3 | MGYG000004381_3_50 | 43914 | 44690 | - | 2.A.5.5.2 |
| pfam | MGYG000004381_3 | MGYG000004381_3_51 | 45065 | 46060 | + | EamA | EamA |
| TC | MGYG000004381_3 | MGYG000004381_3_52 | 46040 | 47362 | - | 2.A.22.5.2 |
| CAZyme | MGYG000004381_3 | MGYG000004381_3_53 | 47387 | 48856 | - | CE4 |
| TF | MGYG000004381_3 | MGYG000004381_3_54 | 49161 | 50045 | - | HTH_1 |
| pfam | MGYG000004381_3 | MGYG000004381_3_55 | 50207 | 50551 | + | HEAT_2 |
| TC | MGYG000004381_3 | MGYG000004381_3_56 | 50796 | 52247 | + | 3.A.1.11.8 |
| TC | MGYG000004381_3 | MGYG000004381_3_57 | 52260 | 53054 | + | 3.A.1.11.1 |
| TC | MGYG000004381_3 | MGYG000004381_3_58 | 53051 | 53857 | + | 3.A.1.11.2 |
| pfam | MGYG000004381_3 | MGYG000004381_3_59 | 53850 | 55334 | + | SBP_bac_6 | SBP_bac_8 |
| STP | MGYG000004381_3 | MGYG000004381_3_60 | 55507 | 57426 | - | EAL |
| TC | MGYG000004381_3 | MGYG000004381_3_61 | 57670 | 59640 | + | 8.A.59.4.1 |
Gene ID: MGYG000004381_3_47
Type: TC
Location: 38958 - 40748 (+)
Type: TC
Location: 38958 - 40748 (+)
Gene ID: MGYG000004381_3_48
Type: TC
Location: 40750 - 42483 (+)
Type: TC
Location: 40750 - 42483 (+)
Gene ID: MGYG000004381_3_49
Type: pfam
Location: 42918 - 43889 (+)
Type: pfam
Location: 42918 - 43889 (+)
Gene ID: MGYG000004381_3_50
Type: TC
Location: 43914 - 44690 (-)
Type: TC
Location: 43914 - 44690 (-)
Gene ID: MGYG000004381_3_51
Type: pfam
Location: 45065 - 46060 (+)
Type: pfam
Location: 45065 - 46060 (+)
Gene ID: MGYG000004381_3_52
Type: TC
Location: 46040 - 47362 (-)
Type: TC
Location: 46040 - 47362 (-)
Gene ID: MGYG000004381_3_53
Type: CAZyme
Location: 47387 - 48856 (-)
Type: CAZyme
Location: 47387 - 48856 (-)
Gene ID: MGYG000004381_3_54
Type: TF
Location: 49161 - 50045 (-)
Type: TF
Location: 49161 - 50045 (-)
Gene ID: MGYG000004381_3_55
Type: pfam
Location: 50207 - 50551 (+)
Type: pfam
Location: 50207 - 50551 (+)
Gene ID: MGYG000004381_3_56
Type: TC
Location: 50796 - 52247 (+)
Type: TC
Location: 50796 - 52247 (+)
Gene ID: MGYG000004381_3_57
Type: TC
Location: 52260 - 53054 (+)
Type: TC
Location: 52260 - 53054 (+)
Gene ID: MGYG000004381_3_58
Type: TC
Location: 53051 - 53857 (+)
Type: TC
Location: 53051 - 53857 (+)
Gene ID: MGYG000004381_3_59
Type: pfam
Location: 53850 - 55334 (+)
Type: pfam
Location: 53850 - 55334 (+)
Gene ID: MGYG000004381_3_60
Type: STP
Location: 55507 - 57426 (-)
Type: STP
Location: 55507 - 57426 (-)
Gene ID: MGYG000004381_3_61
Type: TC
Location: 57670 - 59640 (+)
Type: TC
Location: 57670 - 59640 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900772425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.