Cluster: MGYG000004380_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004380
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004380_2 | MGYG000004380_2_75 | 79210 | 80664 | + | 9.B.18.1.2 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_76 | 80681 | 81904 | + | GT4 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_77 | 81906 | 82871 | + | GT2 |
| TC | MGYG000004380_2 | MGYG000004380_2_78 | 82890 | 84296 | + | 3.A.1.104.1 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_79 | 84315 | 86003 | + | GT2 |
| TC | MGYG000004380_2 | MGYG000004380_2_80 | 86028 | 87323 | + | 3.A.1.103.6 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_81 | 87350 | 88069 | + | GT2 |
| pfam | MGYG000004380_2 | MGYG000004380_2_82 | 88053 | 88418 | + | DUF2304 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_83 | 88402 | 89196 | + | GT2 |
| pfam | MGYG000004380_2 | MGYG000004380_2_84 | 89219 | 90601 | + | DUF2142 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_85 | 90631 | 93057 | + | GT2 | GT2 |
| pfam | MGYG000004380_2 | MGYG000004380_2_86 | 93115 | 93912 | + | RrnaAD | PCMT | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| CAZyme | MGYG000004380_2 | MGYG000004380_2_87 | 93926 | 97087 | + | GT2 | GT2 |
Gene ID: MGYG000004380_2_75
Type: TC
Location: 79210 - 80664 (+)
Type: TC
Location: 79210 - 80664 (+)
Gene ID: MGYG000004380_2_76
Type: CAZyme
Location: 80681 - 81904 (+)
Type: CAZyme
Location: 80681 - 81904 (+)
Gene ID: MGYG000004380_2_77
Type: CAZyme
Location: 81906 - 82871 (+)
Type: CAZyme
Location: 81906 - 82871 (+)
Gene ID: MGYG000004380_2_78
Type: TC
Location: 82890 - 84296 (+)
Type: TC
Location: 82890 - 84296 (+)
Gene ID: MGYG000004380_2_79
Type: CAZyme
Location: 84315 - 86003 (+)
Type: CAZyme
Location: 84315 - 86003 (+)
Gene ID: MGYG000004380_2_80
Type: TC
Location: 86028 - 87323 (+)
Type: TC
Location: 86028 - 87323 (+)
Gene ID: MGYG000004380_2_81
Type: CAZyme
Location: 87350 - 88069 (+)
Type: CAZyme
Location: 87350 - 88069 (+)
Gene ID: MGYG000004380_2_82
Type: pfam
Location: 88053 - 88418 (+)
Type: pfam
Location: 88053 - 88418 (+)
Gene ID: MGYG000004380_2_83
Type: CAZyme
Location: 88402 - 89196 (+)
Type: CAZyme
Location: 88402 - 89196 (+)
Gene ID: MGYG000004380_2_84
Type: pfam
Location: 89219 - 90601 (+)
Type: pfam
Location: 89219 - 90601 (+)
Gene ID: MGYG000004380_2_85
Type: CAZyme
Location: 90631 - 93057 (+)
Type: CAZyme
Location: 90631 - 93057 (+)
Gene ID: MGYG000004380_2_86
Type: pfam
Location: 93115 - 93912 (+)
Type: pfam
Location: 93115 - 93912 (+)
Gene ID: MGYG000004380_2_87
Type: CAZyme
Location: 93926 - 97087 (+)
Type: CAZyme
Location: 93926 - 97087 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-590
Species
CAG-590 sp934293575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.