Cluster: MGYG000004380_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004380
- CGC Family ID: CGCFAM_00344
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004380_2 | MGYG000004380_2_52 | 53472 | 54410 | + | GT2 |
| TF | MGYG000004380_2 | MGYG000004380_2_53 | 55386 | 56261 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | MGYG000004380_2 | MGYG000004380_2_54 | 56426 | 56833 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004380_2 | MGYG000004380_2_55 | 56830 | 58563 | + | 3.A.1.106.2 |
| TC | MGYG000004380_2 | MGYG000004380_2_56 | 58566 | 60233 | + | 3.A.1.106.2 |
Gene ID: MGYG000004380_2_52
Type: CAZyme
Location: 53472 - 54410 (+)
Type: CAZyme
Location: 53472 - 54410 (+)
Gene ID: MGYG000004380_2_53
Type: TF
Location: 55386 - 56261 (-)
Type: TF
Location: 55386 - 56261 (-)
Gene ID: MGYG000004380_2_54
Type:
Location: 56426 - 56833 (+)
Type:
Location: 56426 - 56833 (+)
Gene ID: MGYG000004380_2_55
Type: TC
Location: 56830 - 58563 (+)
Type: TC
Location: 56830 - 58563 (+)
Gene ID: MGYG000004380_2_56
Type: TC
Location: 58566 - 60233 (+)
Type: TC
Location: 58566 - 60233 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-590
Species
CAG-590 sp934293575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.