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Cluster: MGYG000004380_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004380_10 MGYG000004380_10_54 50089 52380 + CBM4 | GH9
pfam MGYG000004380_10 MGYG000004380_10_55 52629 53384 + Exo_endo_phos
TF MGYG000004380_10 MGYG000004380_10_56 53508 53900 + GntR
TC MGYG000004380_10 MGYG000004380_10_57 53881 54576 + 3.A.1.132.6
NULL(UNKNOWN) MGYG000004380_10 MGYG000004380_10_58 54570 55397 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004380_10 MGYG000004380_10_59 55416 56132 + 3.A.1.122.14
TC MGYG000004380_10 MGYG000004380_10_60 56142 57575 + 2.A.6.2.47
TC MGYG000004380_10 MGYG000004380_10_61 57619 58851 + 3.A.1.122.2
Gene ID: MGYG000004380_10_54
Type: CAZyme
Location: 50089 - 52380 (+)
Gene ID: MGYG000004380_10_55
Type: pfam
Location: 52629 - 53384 (+)
Gene ID: MGYG000004380_10_56
Type: TF
Location: 53508 - 53900 (+)
Gene ID: MGYG000004380_10_57
Type: TC
Location: 53881 - 54576 (+)
Gene ID: MGYG000004380_10_58
Type:
Location: 54570 - 55397 (+)
Gene ID: MGYG000004380_10_59
Type: TC
Location: 55416 - 56132 (+)
Gene ID: MGYG000004380_10_60
Type: TC
Location: 56142 - 57575 (+)
Gene ID: MGYG000004380_10_61
Type: TC
Location: 57619 - 58851 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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