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Cluster: MGYG000004378_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004378_4 MGYG000004378_4_30 26738 28432 + 4.A.3.1.1
STP MGYG000004378_4 MGYG000004378_4_31 28595 28990 + DeoRC
pfam MGYG000004378_4 MGYG000004378_4_32 29096 30328 - Fic
CAZyme MGYG000004378_4 MGYG000004378_4_33 30695 32116 - GH1
TC MGYG000004378_4 MGYG000004378_4_34 32192 33979 - 4.A.3.1.1
TF MGYG000004378_4 MGYG000004378_4_35 34255 35265 + LacI
TC MGYG000004378_4 MGYG000004378_4_36 35523 37283 - 4.A.3.1.1
CAZyme MGYG000004378_4 MGYG000004378_4_37 37460 38902 - GH1
TF MGYG000004378_4 MGYG000004378_4_38 39244 40281 + LacI
CAZyme MGYG000004378_4 MGYG000004378_4_39 40543 41982 - GH1
TC MGYG000004378_4 MGYG000004378_4_40 42069 43823 - 4.A.3.1.1
TF MGYG000004378_4 MGYG000004378_4_41 44151 45185 + LacI
TC MGYG000004378_4 MGYG000004378_4_42 45400 45738 + 4.A.3.1.2
Gene ID: MGYG000004378_4_30
Type: TC
Location: 26738 - 28432 (+)
Gene ID: MGYG000004378_4_31
Type: STP
Location: 28595 - 28990 (+)
Gene ID: MGYG000004378_4_32
Type: pfam
Location: 29096 - 30328 (-)
Gene ID: MGYG000004378_4_33
Type: CAZyme
Location: 30695 - 32116 (-)
Gene ID: MGYG000004378_4_34
Type: TC
Location: 32192 - 33979 (-)
Gene ID: MGYG000004378_4_35
Type: TF
Location: 34255 - 35265 (+)
Gene ID: MGYG000004378_4_36
Type: TC
Location: 35523 - 37283 (-)
Gene ID: MGYG000004378_4_37
Type: CAZyme
Location: 37460 - 38902 (-)
Gene ID: MGYG000004378_4_38
Type: TF
Location: 39244 - 40281 (+)
Gene ID: MGYG000004378_4_39
Type: CAZyme
Location: 40543 - 41982 (-)
Gene ID: MGYG000004378_4_40
Type: TC
Location: 42069 - 43823 (-)
Gene ID: MGYG000004378_4_41
Type: TF
Location: 44151 - 45185 (+)
Gene ID: MGYG000004378_4_42
Type: TC
Location: 45400 - 45738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004378_4_38 vegetarian > omnivore 1.04426 0.02695

🧭 Explore Read Mapping of CGC

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