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Cluster: MGYG000004378_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004378_4 MGYG000004378_4_13 11020 11463 + 4.A.6.1.16
pfam MGYG000004378_4 MGYG000004378_4_14 11463 11744 + YajC
TC MGYG000004378_4 MGYG000004378_4_15 11781 12263 + 4.A.6.1.4
TC MGYG000004378_4 MGYG000004378_4_16 12354 13154 + 4.A.6.1.4
TC MGYG000004378_4 MGYG000004378_4_17 13144 14226 + 4.A.6.1.4
TF MGYG000004378_4 MGYG000004378_4_18 14411 15142 + GntR
STP MGYG000004378_4 MGYG000004378_4_19 15257 16423 + SIS | SIS
CAZyme MGYG000004378_4 MGYG000004378_4_20 16542 17711 + CE9
Gene ID: MGYG000004378_4_13
Type: TC
Location: 11020 - 11463 (+)
Gene ID: MGYG000004378_4_14
Type: pfam
Location: 11463 - 11744 (+)
Gene ID: MGYG000004378_4_15
Type: TC
Location: 11781 - 12263 (+)
Gene ID: MGYG000004378_4_16
Type: TC
Location: 12354 - 13154 (+)
Gene ID: MGYG000004378_4_17
Type: TC
Location: 13144 - 14226 (+)
Gene ID: MGYG000004378_4_18
Type: TF
Location: 14411 - 15142 (+)
Gene ID: MGYG000004378_4_19
Type: STP
Location: 15257 - 16423 (+)
Gene ID: MGYG000004378_4_20
Type: CAZyme
Location: 16542 - 17711 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004378_4_14 vegan > omnivore 1.10581 0.00566

🧭 Explore Read Mapping of CGC

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