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Cluster: MGYG000004378_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004378_3 MGYG000004378_3_46 51051 51845 - 3.A.1.34.1
TC MGYG000004378_3 MGYG000004378_3_47 51838 52761 - 3.A.1.34.1
TC MGYG000004378_3 MGYG000004378_3_48 52965 53945 - 3.A.1.34.1
pfam MGYG000004378_3 MGYG000004378_3_49 54107 54889 - WYL
pfam MGYG000004378_3 MGYG000004378_3_50 55148 56551 - tRNA-synt_2 | tRNA_anti-codon
TC MGYG000004378_3 MGYG000004378_3_51 56733 57296 - 4.A.1.2.6
peptidase MGYG000004378_3 MGYG000004378_3_52 57541 58440 + S09.UPW
TC MGYG000004378_3 MGYG000004378_3_53 58981 61341 + 9.A.8.1.6
TC MGYG000004378_3 MGYG000004378_3_54 61656 63320 + 4.A.1.1.3
TF MGYG000004378_3 MGYG000004378_3_55 63383 64135 - HTH_6
CAZyme MGYG000004378_3 MGYG000004378_3_56 64311 65684 + GH4
NULL(UNKNOWN) MGYG000004378_3 MGYG000004378_3_57 65850 66602 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004378_3 MGYG000004378_3_58 66778 67902 + 2.A.1.2.18
Gene ID: MGYG000004378_3_46
Type: TC
Location: 51051 - 51845 (-)
Gene ID: MGYG000004378_3_47
Type: TC
Location: 51838 - 52761 (-)
Gene ID: MGYG000004378_3_48
Type: TC
Location: 52965 - 53945 (-)
Gene ID: MGYG000004378_3_49
Type: pfam
Location: 54107 - 54889 (-)
Gene ID: MGYG000004378_3_50
Type: pfam
Location: 55148 - 56551 (-)
Gene ID: MGYG000004378_3_51
Type: TC
Location: 56733 - 57296 (-)
Gene ID: MGYG000004378_3_52
Type: peptidase
Location: 57541 - 58440 (+)
Gene ID: MGYG000004378_3_53
Type: TC
Location: 58981 - 61341 (+)
Gene ID: MGYG000004378_3_54
Type: TC
Location: 61656 - 63320 (+)
Gene ID: MGYG000004378_3_55
Type: TF
Location: 63383 - 64135 (-)
Gene ID: MGYG000004378_3_56
Type: CAZyme
Location: 64311 - 65684 (+)
Gene ID: MGYG000004378_3_57
Type:
Location: 65850 - 66602 (+)
Gene ID: MGYG000004378_3_58
Type: TC
Location: 66778 - 67902 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004378_3_54 vegan > omnivore 1.09544 0.00566
MGYG000004378_3_56 vegan > omnivore 1.67806 0.00566
MGYG000004378_3_57 vegan > omnivore 1.87981 0.00566

🧭 Explore Read Mapping of CGC

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