Cluster: MGYG000004375_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004375
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004375_18 | MGYG000004375_18_16 | 12483 | 12911 | + | 4.A.6.1.7 |
| pfam | MGYG000004375_18 | MGYG000004375_18_17 | 12966 | 13457 | + | PTSIIB_sorb |
| pfam | MGYG000004375_18 | MGYG000004375_18_18 | 13514 | 14353 | + | EII-Sor |
| TC | MGYG000004375_18 | MGYG000004375_18_19 | 14356 | 15186 | + | 4.A.6.1.16 |
| NULL(UNKNOWN) | MGYG000004375_18 | MGYG000004375_18_20 | 15276 | 15593 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004375_18 | MGYG000004375_18_21 | 15838 | 16935 | + | GT4 |
| TC | MGYG000004375_18 | MGYG000004375_18_22 | 16944 | 17984 | + | 4.D.2.1.5 |
| CAZyme | MGYG000004375_18 | MGYG000004375_18_23 | 17988 | 19955 | + | GT4 |
Gene ID: MGYG000004375_18_16
Type: TC
Location: 12483 - 12911 (+)
Type: TC
Location: 12483 - 12911 (+)
Gene ID: MGYG000004375_18_17
Type: pfam
Location: 12966 - 13457 (+)
Type: pfam
Location: 12966 - 13457 (+)
Gene ID: MGYG000004375_18_18
Type: pfam
Location: 13514 - 14353 (+)
Type: pfam
Location: 13514 - 14353 (+)
Gene ID: MGYG000004375_18_19
Type: TC
Location: 14356 - 15186 (+)
Type: TC
Location: 14356 - 15186 (+)
Gene ID: MGYG000004375_18_20
Type:
Location: 15276 - 15593 (+)
Type:
Location: 15276 - 15593 (+)
Gene ID: MGYG000004375_18_21
Type: CAZyme
Location: 15838 - 16935 (+)
Type: CAZyme
Location: 15838 - 16935 (+)
Gene ID: MGYG000004375_18_22
Type: TC
Location: 16944 - 17984 (+)
Type: TC
Location: 16944 - 17984 (+)
Gene ID: MGYG000004375_18_23
Type: CAZyme
Location: 17988 - 19955 (+)
Type: CAZyme
Location: 17988 - 19955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900754615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004375_18_16 | vegan > omnivore | 20.42515 | 0.00574 |
| MGYG000004375_18_16 | vegetarian > omnivore | 20.05875 | 0.01332 |
| MGYG000004375_18_17 | vegan > omnivore | 1.11684 | 0.00574 |
| MGYG000004375_18_18 | vegan > omnivore | 3.11475 | 0.00574 |
| MGYG000004375_18_18 | vegetarian > omnivore | 4.39670 | 0.01332 |
| MGYG000004375_18_19 | vegan > omnivore | 2.70279 | 0.00574 |
| MGYG000004375_18_19 | vegetarian > omnivore | 1.13737 | 0.01332 |
| MGYG000004375_18_20 | vegan > omnivore | 18.93541 | 0.00574 |
| MGYG000004375_18_20 | vegetarian > omnivore | 20.07908 | 0.01332 |
| MGYG000004375_18_21 | vegan > omnivore | 3.53577 | 0.00574 |
| MGYG000004375_18_21 | vegetarian > omnivore | 3.77383 | 0.01332 |
| MGYG000004375_18_22 | vegan > omnivore | 18.67180 | 0.00574 |
| MGYG000004375_18_22 | vegetarian > omnivore | 19.69348 | 0.01332 |