Cluster: MGYG000004375_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004375
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004375_3 | MGYG000004375_3_19 | 18591 | 20546 | + | 3.A.16.1.1 |
| pfam | MGYG000004375_3 | MGYG000004375_3_20 | 20643 | 21527 | + | HSP33 |
| pfam | MGYG000004375_3 | MGYG000004375_3_21 | 21520 | 22485 | + | His_biosynth | His_biosynth | Dus |
| CAZyme | MGYG000004375_3 | MGYG000004375_3_22 | 22589 | 24415 | + | CBM48 | GH13_9 |
Gene ID: MGYG000004375_3_19
Type: TC
Location: 18591 - 20546 (+)
Type: TC
Location: 18591 - 20546 (+)
Gene ID: MGYG000004375_3_20
Type: pfam
Location: 20643 - 21527 (+)
Type: pfam
Location: 20643 - 21527 (+)
Gene ID: MGYG000004375_3_21
Type: pfam
Location: 21520 - 22485 (+)
Type: pfam
Location: 21520 - 22485 (+)
Gene ID: MGYG000004375_3_22
Type: CAZyme
Location: 22589 - 24415 (+)
Type: CAZyme
Location: 22589 - 24415 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900754615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004375_3_20 | vegetarian > omnivore | 1.27433 | 0.01332 |
| MGYG000004375_3_21 | vegetarian > omnivore | 1.44485 | 0.01332 |
| MGYG000004375_3_22 | vegetarian > omnivore | 1.50884 | 0.01332 |