Cluster: MGYG000004375_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004375
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004375_1 | MGYG000004375_1_75 | 83340 | 84170 | + | 3.A.1.104.1 |
| TC | MGYG000004375_1 | MGYG000004375_1_76 | 84180 | 84998 | + | 3.A.1.104.2 |
| pfam | MGYG000004375_1 | MGYG000004375_1_77 | 85078 | 85464 | + | CTP_transf_like |
| CAZyme | MGYG000004375_1 | MGYG000004375_1_78 | 85466 | 87703 | + | GT2 |
| pfam | MGYG000004375_1 | MGYG000004375_1_79 | 87721 | 88926 | + | Glyphos_transf |
| pfam | MGYG000004375_1 | MGYG000004375_1_80 | 88928 | 89992 | + | Glyphos_transf |
| TC | MGYG000004375_1 | MGYG000004375_1_81 | 90376 | 91569 | + | 2.A.120.1.3 |
Gene ID: MGYG000004375_1_75
Type: TC
Location: 83340 - 84170 (+)
Type: TC
Location: 83340 - 84170 (+)
Gene ID: MGYG000004375_1_76
Type: TC
Location: 84180 - 84998 (+)
Type: TC
Location: 84180 - 84998 (+)
Gene ID: MGYG000004375_1_77
Type: pfam
Location: 85078 - 85464 (+)
Type: pfam
Location: 85078 - 85464 (+)
Gene ID: MGYG000004375_1_78
Type: CAZyme
Location: 85466 - 87703 (+)
Type: CAZyme
Location: 85466 - 87703 (+)
Gene ID: MGYG000004375_1_79
Type: pfam
Location: 87721 - 88926 (+)
Type: pfam
Location: 87721 - 88926 (+)
Gene ID: MGYG000004375_1_80
Type: pfam
Location: 88928 - 89992 (+)
Type: pfam
Location: 88928 - 89992 (+)
Gene ID: MGYG000004375_1_81
Type: TC
Location: 90376 - 91569 (+)
Type: TC
Location: 90376 - 91569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp900754615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004375_1_75 | vegan > omnivore | 3.54470 | 0.00574 |
| MGYG000004375_1_75 | vegetarian > omnivore | 2.98899 | 0.01332 |
| MGYG000004375_1_76 | vegan > omnivore | 1.90322 | 0.00574 |
| MGYG000004375_1_76 | vegetarian > omnivore | 2.32660 | 0.01332 |
| MGYG000004375_1_79 | vegan > omnivore | 2.75398 | 0.00574 |
| MGYG000004375_1_79 | vegetarian > omnivore | 3.29324 | 0.01332 |
| MGYG000004375_1_81 | vegan > omnivore | 1.31869 | 0.00574 |
| MGYG000004375_1_81 | vegetarian > omnivore | 1.49872 | 0.01332 |