Cluster: MGYG000004367_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004367
- CGC Family ID: CGCFAM_00615
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004367_2 | MGYG000004367_2_95 | 93215 | 94738 | - | GH13_30 |
| TC | MGYG000004367_2 | MGYG000004367_2_96 | 94769 | 95050 | - | 8.A.9.1.2 |
| STP | MGYG000004367_2 | MGYG000004367_2_97 | 95534 | 96280 | - | STAS |
| STP | MGYG000004367_2 | MGYG000004367_2_98 | 96362 | 98707 | - | GAF | SpoIIE |
| TC | MGYG000004367_2 | MGYG000004367_2_99 | 99450 | 100478 | - | 3.A.1.5.36 |
| TC | MGYG000004367_2 | MGYG000004367_2_100 | 100478 | 101569 | - | 3.A.1.5.34 |
| TC | MGYG000004367_2 | MGYG000004367_2_101 | 101572 | 102507 | - | 3.A.1.5.11 |
| TC | MGYG000004367_2 | MGYG000004367_2_102 | 102522 | 103559 | - | 3.A.1.5.37 |
| TC | MGYG000004367_2 | MGYG000004367_2_103 | 103716 | 105392 | - | 3.A.1.5.35 |
Gene ID: MGYG000004367_2_95
Type: CAZyme
Location: 93215 - 94738 (-)
Type: CAZyme
Location: 93215 - 94738 (-)
Gene ID: MGYG000004367_2_96
Type: TC
Location: 94769 - 95050 (-)
Type: TC
Location: 94769 - 95050 (-)
Gene ID: MGYG000004367_2_97
Type: STP
Location: 95534 - 96280 (-)
Type: STP
Location: 95534 - 96280 (-)
Gene ID: MGYG000004367_2_98
Type: STP
Location: 96362 - 98707 (-)
Type: STP
Location: 96362 - 98707 (-)
Gene ID: MGYG000004367_2_99
Type: TC
Location: 99450 - 100478 (-)
Type: TC
Location: 99450 - 100478 (-)
Gene ID: MGYG000004367_2_100
Type: TC
Location: 100478 - 101569 (-)
Type: TC
Location: 100478 - 101569 (-)
Gene ID: MGYG000004367_2_101
Type: TC
Location: 101572 - 102507 (-)
Type: TC
Location: 101572 - 102507 (-)
Gene ID: MGYG000004367_2_102
Type: TC
Location: 102522 - 103559 (-)
Type: TC
Location: 102522 - 103559 (-)
Gene ID: MGYG000004367_2_103
Type: TC
Location: 103716 - 105392 (-)
Type: TC
Location: 103716 - 105392 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.