Cluster: MGYG000004367_CGC12
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004367
- CGC Family ID: CGCFAM_00286
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004367_15 | MGYG000004367_15_11 | 12204 | 13709 | + | GH77 |
| NULL(UNKNOWN) | MGYG000004367_15 | MGYG000004367_15_12 | 13838 | 14104 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004367_15 | MGYG000004367_15_13 | 14210 | 16105 | + | GT35 |
| TC | MGYG000004367_15 | MGYG000004367_15_14 | 16562 | 17761 | - | 3.A.1.1.22 |
| TC | MGYG000004367_15 | MGYG000004367_15_15 | 17830 | 18669 | - | 3.A.1.1.45 |
| TC | MGYG000004367_15 | MGYG000004367_15_16 | 18669 | 19523 | - | 3.A.1.1.45 |
| TC | MGYG000004367_15 | MGYG000004367_15_17 | 19611 | 20927 | - | 3.A.1.1.45 |
| TF | MGYG000004367_15 | MGYG000004367_15_18 | 21234 | 21953 | - | GntR |
| TC | MGYG000004367_15 | MGYG000004367_15_19 | 22178 | 24628 | + | 4.A.1.1.8 |
Gene ID: MGYG000004367_15_11
Type: CAZyme
Location: 12204 - 13709 (+)
Type: CAZyme
Location: 12204 - 13709 (+)
Gene ID: MGYG000004367_15_12
Type:
Location: 13838 - 14104 (+)
Type:
Location: 13838 - 14104 (+)
Gene ID: MGYG000004367_15_13
Type: CAZyme
Location: 14210 - 16105 (+)
Type: CAZyme
Location: 14210 - 16105 (+)
Gene ID: MGYG000004367_15_14
Type: TC
Location: 16562 - 17761 (-)
Type: TC
Location: 16562 - 17761 (-)
Gene ID: MGYG000004367_15_15
Type: TC
Location: 17830 - 18669 (-)
Type: TC
Location: 17830 - 18669 (-)
Gene ID: MGYG000004367_15_16
Type: TC
Location: 18669 - 19523 (-)
Type: TC
Location: 18669 - 19523 (-)
Gene ID: MGYG000004367_15_17
Type: TC
Location: 19611 - 20927 (-)
Type: TC
Location: 19611 - 20927 (-)
Gene ID: MGYG000004367_15_18
Type: TF
Location: 21234 - 21953 (-)
Type: TF
Location: 21234 - 21953 (-)
Gene ID: MGYG000004367_15_19
Type: TC
Location: 22178 - 24628 (+)
Type: TC
Location: 22178 - 24628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.