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Cluster: MGYG000004349_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004349_24 MGYG000004349_24_6 5140 5478 - 4.A.3.1.2
TF MGYG000004349_24 MGYG000004349_24_7 5693 6697 - LacI
TC MGYG000004349_24 MGYG000004349_24_8 7054 8829 + 4.A.3.1.1
CAZyme MGYG000004349_24 MGYG000004349_24_9 8896 10335 + GH1
TF MGYG000004349_24 MGYG000004349_24_10 10603 11640 - LacI
CAZyme MGYG000004349_24 MGYG000004349_24_11 11982 13424 + GH1
TC MGYG000004349_24 MGYG000004349_24_12 13601 15361 + 4.A.3.1.1
TF MGYG000004349_24 MGYG000004349_24_13 15775 16776 - LacI
TC MGYG000004349_24 MGYG000004349_24_14 17060 18838 + 4.A.3.1.1
CAZyme MGYG000004349_24 MGYG000004349_24_15 18914 20335 + GH1
Gene ID: MGYG000004349_24_6
Type: TC
Location: 5140 - 5478 (-)
Gene ID: MGYG000004349_24_7
Type: TF
Location: 5693 - 6697 (-)
Gene ID: MGYG000004349_24_8
Type: TC
Location: 7054 - 8829 (+)
Gene ID: MGYG000004349_24_9
Type: CAZyme
Location: 8896 - 10335 (+)
Gene ID: MGYG000004349_24_10
Type: TF
Location: 10603 - 11640 (-)
Gene ID: MGYG000004349_24_11
Type: CAZyme
Location: 11982 - 13424 (+)
Gene ID: MGYG000004349_24_12
Type: TC
Location: 13601 - 15361 (+)
Gene ID: MGYG000004349_24_13
Type: TF
Location: 15775 - 16776 (-)
Gene ID: MGYG000004349_24_14
Type: TC
Location: 17060 - 18838 (+)
Gene ID: MGYG000004349_24_15
Type: CAZyme
Location: 18914 - 20335 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004349_24_10 vegetarian > omnivore 1.01113 0.03201

🧭 Explore Read Mapping of CGC

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