Cluster: MGYG000004349_CGC11
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004349
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004349_13 | MGYG000004349_13_3 | 2344 | 3345 | - | GT2 |
| pfam | MGYG000004349_13 | MGYG000004349_13_4 | 3348 | 4058 | - | Hexapep | Hexapep_2 |
| CAZyme | MGYG000004349_13 | MGYG000004349_13_5 | 4074 | 5111 | - | GT2 |
| NULL(UNKNOWN) | MGYG000004349_13 | MGYG000004349_13_6 | 5127 | 5681 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004349_13 | MGYG000004349_13_7 | 5665 | 6540 | - | LicD |
| CAZyme | MGYG000004349_13 | MGYG000004349_13_8 | 6542 | 7651 | - | GT4 |
| pfam | MGYG000004349_13 | MGYG000004349_13_9 | 7648 | 8757 | - | Epimerase_2 |
| CAZyme | MGYG000004349_13 | MGYG000004349_13_10 | 8750 | 9556 | - | GT26 |
| TC | MGYG000004349_13 | MGYG000004349_13_11 | 9543 | 10292 | - | 9.B.18.1.2 |
Gene ID: MGYG000004349_13_3
Type: CAZyme
Location: 2344 - 3345 (-)
Type: CAZyme
Location: 2344 - 3345 (-)
Gene ID: MGYG000004349_13_4
Type: pfam
Location: 3348 - 4058 (-)
Type: pfam
Location: 3348 - 4058 (-)
Gene ID: MGYG000004349_13_5
Type: CAZyme
Location: 4074 - 5111 (-)
Type: CAZyme
Location: 4074 - 5111 (-)
Gene ID: MGYG000004349_13_6
Type:
Location: 5127 - 5681 (-)
Type:
Location: 5127 - 5681 (-)
Gene ID: MGYG000004349_13_7
Type: pfam
Location: 5665 - 6540 (-)
Type: pfam
Location: 5665 - 6540 (-)
Gene ID: MGYG000004349_13_8
Type: CAZyme
Location: 6542 - 7651 (-)
Type: CAZyme
Location: 6542 - 7651 (-)
Gene ID: MGYG000004349_13_9
Type: pfam
Location: 7648 - 8757 (-)
Type: pfam
Location: 7648 - 8757 (-)
Gene ID: MGYG000004349_13_10
Type: CAZyme
Location: 8750 - 9556 (-)
Type: CAZyme
Location: 8750 - 9556 (-)
Gene ID: MGYG000004349_13_11
Type: TC
Location: 9543 - 10292 (-)
Type: TC
Location: 9543 - 10292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.