Cluster: MGYG000004344_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004344
- CGC Family ID: CGCFAM_00615
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004344_49 | MGYG000004344_49_2 | 3163 | 4896 | - | GH13_30 |
| STP | MGYG000004344_49 | MGYG000004344_49_3 | 5827 | 6573 | - | STAS |
| STP | MGYG000004344_49 | MGYG000004344_49_4 | 6655 | 9000 | - | GAF | SpoIIE |
| TC | MGYG000004344_49 | MGYG000004344_49_5 | 9742 | 10770 | - | 3.A.1.5.36 |
| TC | MGYG000004344_49 | MGYG000004344_49_6 | 10770 | 11861 | - | 3.A.1.5.34 |
| TC | MGYG000004344_49 | MGYG000004344_49_7 | 11864 | 12598 | - | 3.A.1.5.11 |
Gene ID: MGYG000004344_49_2
Type: CAZyme
Location: 3163 - 4896 (-)
Type: CAZyme
Location: 3163 - 4896 (-)
Gene ID: MGYG000004344_49_3
Type: STP
Location: 5827 - 6573 (-)
Type: STP
Location: 5827 - 6573 (-)
Gene ID: MGYG000004344_49_4
Type: STP
Location: 6655 - 9000 (-)
Type: STP
Location: 6655 - 9000 (-)
Gene ID: MGYG000004344_49_5
Type: TC
Location: 9742 - 10770 (-)
Type: TC
Location: 9742 - 10770 (-)
Gene ID: MGYG000004344_49_6
Type: TC
Location: 10770 - 11861 (-)
Type: TC
Location: 10770 - 11861 (-)
Gene ID: MGYG000004344_49_7
Type: TC
Location: 11864 - 12598 (-)
Type: TC
Location: 11864 - 12598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.