Cluster: MGYG000004340_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004340
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004340_36 | MGYG000004340_36_1 | 1 | 654 | + | 2.A.56.1.5 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_2 | 679 | 2052 | + | GH28 |
| pfam | MGYG000004340_36 | MGYG000004340_36_3 | 2145 | 3314 | + | MFS_1 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_4 | 3531 | 4823 | + | GH2 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_5 | 4834 | 5994 | + | GH88 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_6 | 5994 | 7685 | + | GH154 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_7 | 7672 | 10695 | + | GH2 |
| pfam | MGYG000004340_36 | MGYG000004340_36_8 | 11345 | 11653 | - | DUF3847 |
| TF | MGYG000004340_36 | MGYG000004340_36_9 | 12060 | 13124 | + | LacI |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_10 | 13424 | 15382 | + | GH31_1 |
| CAZyme | MGYG000004340_36 | MGYG000004340_36_11 | 15395 | 17053 | + | GH13_31 |
Gene ID: MGYG000004340_36_1
Type: TC
Location: 1 - 654 (+)
Type: TC
Location: 1 - 654 (+)
Gene ID: MGYG000004340_36_2
Type: CAZyme
Location: 679 - 2052 (+)
Type: CAZyme
Location: 679 - 2052 (+)
Gene ID: MGYG000004340_36_3
Type: pfam
Location: 2145 - 3314 (+)
Type: pfam
Location: 2145 - 3314 (+)
Gene ID: MGYG000004340_36_4
Type: CAZyme
Location: 3531 - 4823 (+)
Type: CAZyme
Location: 3531 - 4823 (+)
Gene ID: MGYG000004340_36_5
Type: CAZyme
Location: 4834 - 5994 (+)
Type: CAZyme
Location: 4834 - 5994 (+)
Gene ID: MGYG000004340_36_6
Type: CAZyme
Location: 5994 - 7685 (+)
Type: CAZyme
Location: 5994 - 7685 (+)
Gene ID: MGYG000004340_36_7
Type: CAZyme
Location: 7672 - 10695 (+)
Type: CAZyme
Location: 7672 - 10695 (+)
Gene ID: MGYG000004340_36_8
Type: pfam
Location: 11345 - 11653 (-)
Type: pfam
Location: 11345 - 11653 (-)
Gene ID: MGYG000004340_36_9
Type: TF
Location: 12060 - 13124 (+)
Type: TF
Location: 12060 - 13124 (+)
Gene ID: MGYG000004340_36_10
Type: CAZyme
Location: 13424 - 15382 (+)
Type: CAZyme
Location: 13424 - 15382 (+)
Gene ID: MGYG000004340_36_11
Type: CAZyme
Location: 15395 - 17053 (+)
Type: CAZyme
Location: 15395 - 17053 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934526125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004340_36_1 | vegetarian > vegan | 1.05062 | 0.01523 |
| MGYG000004340_36_2 | vegetarian > vegan | 1.02185 | 0.01523 |
| MGYG000004340_36_3 | vegetarian > vegan | 1.10658 | 0.01523 |