Cluster: MGYG000004335_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004335
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004335_5 | MGYG000004335_5_82 | 90151 | 92490 | - | 3.A.3.5.15 |
| STP | MGYG000004335_5 | MGYG000004335_5_83 | 92823 | 94907 | - | Pkinase |
| STP | MGYG000004335_5 | MGYG000004335_5_84 | 95079 | 96041 | - | FHA |
| TC | MGYG000004335_5 | MGYG000004335_5_85 | 96550 | 98751 | + | 1.I.1.1.3 |
| STP | MGYG000004335_5 | MGYG000004335_5_86 | 99369 | 100130 | + | Fer4 |
| TC | MGYG000004335_5 | MGYG000004335_5_87 | 100411 | 100923 | + | 4.A.1.2.5 |
| pfam | MGYG000004335_5 | MGYG000004335_5_88 | 100930 | 101796 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000004335_5 | MGYG000004335_5_89 | 101896 | 103512 | + | 4.A.1.1.3 |
| CAZyme | MGYG000004335_5 | MGYG000004335_5_90 | 103516 | 104898 | + | GH4 |
Gene ID: MGYG000004335_5_82
Type: TC
Location: 90151 - 92490 (-)
Type: TC
Location: 90151 - 92490 (-)
Gene ID: MGYG000004335_5_83
Type: STP
Location: 92823 - 94907 (-)
Type: STP
Location: 92823 - 94907 (-)
Gene ID: MGYG000004335_5_84
Type: STP
Location: 95079 - 96041 (-)
Type: STP
Location: 95079 - 96041 (-)
Gene ID: MGYG000004335_5_85
Type: TC
Location: 96550 - 98751 (+)
Type: TC
Location: 96550 - 98751 (+)
Gene ID: MGYG000004335_5_86
Type: STP
Location: 99369 - 100130 (+)
Type: STP
Location: 99369 - 100130 (+)
Gene ID: MGYG000004335_5_87
Type: TC
Location: 100411 - 100923 (+)
Type: TC
Location: 100411 - 100923 (+)
Gene ID: MGYG000004335_5_88
Type: pfam
Location: 100930 - 101796 (+)
Type: pfam
Location: 100930 - 101796 (+)
Gene ID: MGYG000004335_5_89
Type: TC
Location: 101896 - 103512 (+)
Type: TC
Location: 101896 - 103512 (+)
Gene ID: MGYG000004335_5_90
Type: CAZyme
Location: 103516 - 104898 (+)
Type: CAZyme
Location: 103516 - 104898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.